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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1058.1
nTPM
Monaco:
1188.8
nTPM
Schmiedel:
863.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1058.1
HPA sample
nTPM
gdT-cell nTPM: 15.8
Samples: 6
Max nTPM: 75.7
Min nTPM: 0.9
P10809_1007
1.4
P10809_1022
0.9
P10809_1041
6.5
P10809_1060
75.7
P10809_1077
7.6
P10809_1098
2.8
MAIT T-cell nTPM: 79.6
Samples: 6
Max nTPM: 164.9
Min nTPM: 42.8
P10809_1006
42.8
P10809_1024
46.9
P10809_1043
81.7
P10809_1062
164.9
P10809_1083
87.5
P10809_1097
53.6
Memory CD4 T-cell nTPM: 1.9
Samples: 6
Max nTPM: 3.3
Min nTPM: 0.9
P10809_1014
1.4
P10809_1026
1.0
P10809_1045
3.1
P10809_1064
0.9
P10809_1086
3.3
P10809_1113
1.8
Memory CD8 T-cell nTPM: 602.5
Samples: 5
Max nTPM: 726.9
Min nTPM: 526.8
P10809_1012
526.8
P10809_1027
530.0
P10809_1046
726.9
P10809_1065
663.5
P10809_1111
565.1
Naive CD4 T-cell nTPM: 4.6
Samples: 6
Max nTPM: 6.9
Min nTPM: 2.1
P10809_1015
2.1
P10809_1030
2.2
P10809_1049
6.4
P10809_1068
3.9
P10809_1085
5.9
P10809_1112
6.9
Naive CD8 T-cell nTPM: 1058.2
Samples: 6
Max nTPM: 1163.2
Min nTPM: 909.4
P10809_1016
1105.3
P10809_1031
988.7
P10809_1050
909.4
P10809_1069
1163.2
P10809_1087
1149.5
P10809_1110
1032.8
T-reg nTPM: 2.2
Samples: 6
Max nTPM: 8.1
Min nTPM: 0.1
P10809_1018
0.6
P10809_1037
0.1
P10809_1056
0.1
P10809_1075
8.1
P10809_1094
2.7
P10809_1106
1.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1188.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 576.3
Samples: 4
Max nTPM: 752.5
Min nTPM: 406.6
RHH5202_R3573
752.5
RHH5230_R3602
406.6
RHH5259_R3631
533.7
RHH5288_R3660
612.2
Effector memory CD8 T-cell nTPM: 688.6
Samples: 4
Max nTPM: 835.1
Min nTPM: 539.4
RHH5203_R3574
783.1
RHH5231_R3603
835.1
RHH5260_R3632
539.4
RHH5289_R3661
596.9
MAIT T-cell nTPM: 111.3
Samples: 4
Max nTPM: 168.1
Min nTPM: 60.2
RHH5233_R3605
168.1
RHH5205_R3576
60.2
RHH5262_R3634
119.2
RHH5297_R3663
97.8
Memory CD4 T-cell TFH nTPM: 8.8
Samples: 4
Max nTPM: 10.3
Min nTPM: 7.5
RHH5300_R3666
7.5
RHH5236_R3608
10.3
RHH5265_R3637
8.2
RHH5208_R3579
9.3
Memory CD4 T-cell Th1 nTPM: 20.3
Samples: 4
Max nTPM: 26.3
Min nTPM: 16.3
RHH5210_R3581
16.3
RHH5302_R3668
26.3
RHH5238_R3610
21.1
RHH5267_R3639
17.3
Memory CD4 T-cell Th1/Th17 nTPM: 13.8
Samples: 4
Max nTPM: 28.1
Min nTPM: 4.6
RHH5303_R3669
16.6
RHH5211_R3582
28.1
RHH5239_R3611
6.0
RHH5268_R3640
4.6
Memory CD4 T-cell Th17 nTPM: 11.2
Samples: 4
Max nTPM: 14.0
Min nTPM: 9.8
RHH5304_R3670
10.4
RHH5212_R3583
14.0
RHH5240_R3612
9.8
RHH5269_R3641
10.5
Memory CD4 T-cell Th2 nTPM: 19.0
Samples: 4
Max nTPM: 33.4
Min nTPM: 12.8
RHH5305_R3671
13.9
RHH5213_R3584
12.8
RHH5241_R3613
15.7
RHH5270_R3642
33.4
Naive CD4 T-cell nTPM: 18.0
Samples: 4
Max nTPM: 24.0
Min nTPM: 12.9
RHH5306_R3672
24.0
RHH5214_R3585
12.9
RHH5242_R3614
17.6
RHH5271_R3643
17.3
Naive CD8 T-cell nTPM: 1188.8
Samples: 4
Max nTPM: 1472.7
Min nTPM: 920.7
RHH5201_R3572
1364.1
RHH5229_R3601
920.7
RHH5258_R3630
1472.7
RHH5287_R3659
997.7
Non-Vd2 gdTCR nTPM: 44.0
Samples: 4
Max nTPM: 117.4
Min nTPM: 11.5
RHH5235_R3607
18.4
RHH5264_R3636
28.8
RHH5207_R3578
11.5
RHH5299_R3665
117.4
T-reg nTPM: 18.7
Samples: 4
Max nTPM: 21.7
Min nTPM: 15.1
RHH5301_R3667
16.6
RHH5237_R3609
21.7
RHH5266_R3638
21.4
RHH5209_R3580
15.1
Terminal effector memory CD4 T-cell nTPM: 18.5
Samples: 2
Max nTPM: 30.7
Min nTPM: 6.3
RHH5243_R3615
6.3
RHH5272_R3644
30.7
Terminal effector memory CD8 T-cell nTPM: 845.2
Samples: 4
Max nTPM: 1243.8
Min nTPM: 542.4
RHH5232_R3604
976.6
RHH5204_R3575
618.0
RHH5261_R3633
542.4
RHH5296_R3662
1243.8
Vd2 gdTCR nTPM: 42.3
Samples: 4
Max nTPM: 75.5
Min nTPM: 8.0
RHH5234_R3606
48.6
RHH5206_R3577
8.0
RHH5263_R3635
75.5
RHH5298_R3664
36.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
