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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
77.5
nTPM
Monaco:
49.8
nTPM
Schmiedel:
30.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.5
HPA sample
nTPM
gdT-cell nTPM: 47.7
Samples: 6
Max nTPM: 60.3
Min nTPM: 34.9
P10809_1007
34.9
P10809_1022
36.8
P10809_1041
50.0
P10809_1060
47.2
P10809_1077
60.3
P10809_1098
56.8
MAIT T-cell nTPM: 56.2
Samples: 6
Max nTPM: 71.2
Min nTPM: 37.2
P10809_1006
37.2
P10809_1024
71.2
P10809_1043
53.0
P10809_1062
54.5
P10809_1083
66.1
P10809_1097
55.4
Memory CD4 T-cell nTPM: 57.6
Samples: 6
Max nTPM: 72.8
Min nTPM: 45.1
P10809_1014
45.1
P10809_1026
56.2
P10809_1045
57.1
P10809_1064
54.2
P10809_1086
72.8
P10809_1113
60.3
Memory CD8 T-cell nTPM: 62.4
Samples: 5
Max nTPM: 80.7
Min nTPM: 47.3
P10809_1012
47.3
P10809_1027
70.7
P10809_1046
50.6
P10809_1065
62.6
P10809_1111
80.7
Naive CD4 T-cell nTPM: 55.3
Samples: 6
Max nTPM: 64.1
Min nTPM: 43.7
P10809_1015
43.7
P10809_1030
59.0
P10809_1049
60.3
P10809_1068
51.1
P10809_1085
64.1
P10809_1112
53.8
Naive CD8 T-cell nTPM: 56.6
Samples: 6
Max nTPM: 72.1
Min nTPM: 41.4
P10809_1016
41.4
P10809_1031
56.9
P10809_1050
53.6
P10809_1069
65.7
P10809_1087
72.1
P10809_1110
49.7
T-reg nTPM: 77.5
Samples: 6
Max nTPM: 100.7
Min nTPM: 60.9
P10809_1018
60.9
P10809_1037
100.7
P10809_1056
62.9
P10809_1075
79.9
P10809_1094
72.7
P10809_1106
87.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 35.0
Samples: 4
Max nTPM: 60.0
Min nTPM: 22.9
RHH5202_R3573
33.2
RHH5230_R3602
23.7
RHH5259_R3631
22.9
RHH5288_R3660
60.0
Effector memory CD8 T-cell nTPM: 38.1
Samples: 4
Max nTPM: 46.6
Min nTPM: 30.0
RHH5203_R3574
42.7
RHH5231_R3603
46.6
RHH5260_R3632
30.0
RHH5289_R3661
33.1
MAIT T-cell nTPM: 31.9
Samples: 4
Max nTPM: 52.6
Min nTPM: 18.1
RHH5233_R3605
28.9
RHH5205_R3576
18.1
RHH5262_R3634
28.0
RHH5297_R3663
52.6
Memory CD4 T-cell TFH nTPM: 48.2
Samples: 4
Max nTPM: 58.3
Min nTPM: 39.8
RHH5300_R3666
47.6
RHH5236_R3608
58.3
RHH5265_R3637
46.9
RHH5208_R3579
39.8
Memory CD4 T-cell Th1 nTPM: 41.0
Samples: 4
Max nTPM: 49.9
Min nTPM: 27.4
RHH5210_R3581
48.1
RHH5302_R3668
49.9
RHH5238_R3610
27.4
RHH5267_R3639
38.5
Memory CD4 T-cell Th1/Th17 nTPM: 35.0
Samples: 4
Max nTPM: 50.3
Min nTPM: 18.0
RHH5303_R3669
50.3
RHH5211_R3582
42.0
RHH5239_R3611
18.0
RHH5268_R3640
29.7
Memory CD4 T-cell Th17 nTPM: 28.8
Samples: 4
Max nTPM: 36.1
Min nTPM: 18.2
RHH5304_R3670
30.1
RHH5212_R3583
36.1
RHH5240_R3612
18.2
RHH5269_R3641
30.7
Memory CD4 T-cell Th2 nTPM: 36.2
Samples: 4
Max nTPM: 49.0
Min nTPM: 27.9
RHH5305_R3671
36.4
RHH5213_R3584
49.0
RHH5241_R3613
31.4
RHH5270_R3642
27.9
Naive CD4 T-cell nTPM: 41.5
Samples: 4
Max nTPM: 54.5
Min nTPM: 31.1
RHH5306_R3672
38.1
RHH5214_R3585
54.5
RHH5242_R3614
42.2
RHH5271_R3643
31.1
Naive CD8 T-cell nTPM: 32.2
Samples: 4
Max nTPM: 45.5
Min nTPM: 18.0
RHH5201_R3572
45.5
RHH5229_R3601
18.0
RHH5258_R3630
44.4
RHH5287_R3659
21.0
Non-Vd2 gdTCR nTPM: 37.8
Samples: 4
Max nTPM: 48.2
Min nTPM: 23.5
RHH5235_R3607
23.5
RHH5264_R3636
48.2
RHH5207_R3578
39.8
RHH5299_R3665
39.5
T-reg nTPM: 43.0
Samples: 4
Max nTPM: 60.4
Min nTPM: 27.7
RHH5301_R3667
60.4
RHH5237_R3609
43.1
RHH5266_R3638
27.7
RHH5209_R3580
40.8
Terminal effector memory CD4 T-cell nTPM: 30.9
Samples: 2
Max nTPM: 35.9
Min nTPM: 25.8
RHH5243_R3615
25.8
RHH5272_R3644
35.9
Terminal effector memory CD8 T-cell nTPM: 47.3
Samples: 4
Max nTPM: 59.2
Min nTPM: 38.6
RHH5232_R3604
38.6
RHH5204_R3575
59.2
RHH5261_R3633
46.7
RHH5296_R3662
44.5
Vd2 gdTCR nTPM: 49.9
Samples: 4
Max nTPM: 68.8
Min nTPM: 31.8
RHH5234_R3606
41.1
RHH5206_R3577
68.8
RHH5263_R3635
31.8
RHH5298_R3664
57.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
