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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1247.8
nTPM
Monaco:
233.4
nTPM
Schmiedel:
105.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1247.8
HPA sample
nTPM
gdT-cell nTPM: 304.1
Samples: 6
Max nTPM: 398.4
Min nTPM: 180.5
P10809_1007
180.5
P10809_1022
307.5
P10809_1041
374.2
P10809_1060
398.4
P10809_1077
271.6
P10809_1098
292.1
MAIT T-cell nTPM: 403.8
Samples: 6
Max nTPM: 520.9
Min nTPM: 260.3
P10809_1006
260.3
P10809_1024
397.4
P10809_1043
520.9
P10809_1062
439.2
P10809_1083
334.7
P10809_1097
470.5
Memory CD4 T-cell nTPM: 510.8
Samples: 6
Max nTPM: 708.9
Min nTPM: 358.9
P10809_1014
358.9
P10809_1026
708.9
P10809_1045
550.2
P10809_1064
509.0
P10809_1086
381.0
P10809_1113
556.8
Memory CD8 T-cell nTPM: 432.5
Samples: 5
Max nTPM: 510.9
Min nTPM: 340.7
P10809_1012
340.7
P10809_1027
481.9
P10809_1046
442.6
P10809_1065
386.4
P10809_1111
510.9
Naive CD4 T-cell nTPM: 366.8
Samples: 6
Max nTPM: 533.8
Min nTPM: 219.6
P10809_1015
219.6
P10809_1030
363.7
P10809_1049
533.8
P10809_1068
401.2
P10809_1085
326.6
P10809_1112
355.9
Naive CD8 T-cell nTPM: 392.0
Samples: 6
Max nTPM: 492.5
Min nTPM: 266.4
P10809_1016
313.4
P10809_1031
492.5
P10809_1050
448.9
P10809_1069
434.4
P10809_1087
266.4
P10809_1110
396.4
T-reg nTPM: 1247.8
Samples: 6
Max nTPM: 1835.6
Min nTPM: 788.7
P10809_1018
788.7
P10809_1037
1091.5
P10809_1056
1835.6
P10809_1075
1297.6
P10809_1094
1312.3
P10809_1106
1160.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
233.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 182.6
Samples: 4
Max nTPM: 245.3
Min nTPM: 137.2
RHH5202_R3573
157.1
RHH5230_R3602
137.2
RHH5259_R3631
190.6
RHH5288_R3660
245.3
Effector memory CD8 T-cell nTPM: 127.3
Samples: 4
Max nTPM: 153.9
Min nTPM: 85.6
RHH5203_R3574
139.5
RHH5231_R3603
130.2
RHH5260_R3632
153.9
RHH5289_R3661
85.6
MAIT T-cell nTPM: 151.4
Samples: 4
Max nTPM: 219.4
Min nTPM: 113.6
RHH5233_R3605
113.6
RHH5205_R3576
116.9
RHH5262_R3634
155.8
RHH5297_R3663
219.4
Memory CD4 T-cell TFH nTPM: 228.4
Samples: 4
Max nTPM: 286.9
Min nTPM: 183.9
RHH5300_R3666
229.8
RHH5236_R3608
286.9
RHH5265_R3637
212.9
RHH5208_R3579
183.9
Memory CD4 T-cell Th1 nTPM: 192.9
Samples: 4
Max nTPM: 310.5
Min nTPM: 129.5
RHH5210_R3581
129.5
RHH5302_R3668
310.5
RHH5238_R3610
141.8
RHH5267_R3639
189.8
Memory CD4 T-cell Th1/Th17 nTPM: 182.0
Samples: 4
Max nTPM: 236.2
Min nTPM: 96.3
RHH5303_R3669
236.2
RHH5211_R3582
194.0
RHH5239_R3611
96.3
RHH5268_R3640
201.6
Memory CD4 T-cell Th17 nTPM: 140.2
Samples: 4
Max nTPM: 171.7
Min nTPM: 89.6
RHH5304_R3670
158.5
RHH5212_R3583
171.7
RHH5240_R3612
89.6
RHH5269_R3641
140.9
Memory CD4 T-cell Th2 nTPM: 181.2
Samples: 4
Max nTPM: 203.1
Min nTPM: 171.9
RHH5305_R3671
203.1
RHH5213_R3584
175.1
RHH5241_R3613
171.9
RHH5270_R3642
174.7
Naive CD4 T-cell nTPM: 168.1
Samples: 4
Max nTPM: 200.0
Min nTPM: 107.1
RHH5306_R3672
180.3
RHH5214_R3585
200.0
RHH5242_R3614
107.1
RHH5271_R3643
185.0
Naive CD8 T-cell nTPM: 175.6
Samples: 4
Max nTPM: 269.9
Min nTPM: 125.5
RHH5201_R3572
125.5
RHH5229_R3601
132.6
RHH5258_R3630
269.9
RHH5287_R3659
174.5
Non-Vd2 gdTCR nTPM: 161.9
Samples: 4
Max nTPM: 223.1
Min nTPM: 106.9
RHH5235_R3607
109.5
RHH5264_R3636
223.1
RHH5207_R3578
106.9
RHH5299_R3665
207.9
T-reg nTPM: 233.4
Samples: 4
Max nTPM: 297.5
Min nTPM: 193.2
RHH5301_R3667
297.5
RHH5237_R3609
228.3
RHH5266_R3638
193.2
RHH5209_R3580
214.7
Terminal effector memory CD4 T-cell nTPM: 114.1
Samples: 2
Max nTPM: 162.8
Min nTPM: 65.3
RHH5243_R3615
65.3
RHH5272_R3644
162.8
Terminal effector memory CD8 T-cell nTPM: 173.1
Samples: 4
Max nTPM: 325.2
Min nTPM: 81.0
RHH5232_R3604
81.0
RHH5204_R3575
325.2
RHH5261_R3633
140.1
RHH5296_R3662
145.9
Vd2 gdTCR nTPM: 188.6
Samples: 4
Max nTPM: 263.2
Min nTPM: 99.3
RHH5234_R3606
99.3
RHH5206_R3577
263.2
RHH5263_R3635
140.2
RHH5298_R3664
251.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.