HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:12.1 nTPM
HPA Brain:16.9 nTPM
GTEx:12.1 nTPM
FANTOM5:14.7 Scaled Tags Per Million
Pig:11.0 nTPM
Mouse:30.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007023
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.9
Sample id Sample description nTPM
Hippocampus
nTPM: 14.4
1898 Male, age 80, left hemisphere 15.1
2529 Female, age 94, left hemisphere 15.0
1911 Female, age 85, right hemisphere 14.4
2148 Female, age 91, left hemisphere 14.4
1855 Male, age 76, left hemisphere 14.3
2621 Female, age 67, right hemisphere 13.5
Dentate gyrus
nTPM: 14.7
2531 Female, age 67, both hemispheres 16.0
2010 Male, age 76, both hemispheres 15.4
2246 Female, age 85, both hemispheres 15.0
1927 Female, age 91, both hemispheres 14.7
2530 Female, age 94, left hemisphere 14.5
2528 Male, age 74, both hemispheres 12.4
Entorhinal gyrus
nTPM: 16.2
2117 Female, age 91, right hemisphere 17.8
2686 Male, age 75, right hemisphere 17.2
1787 Male, age 76, left hemisphere 16.7
1938 Female, age 85, left hemisphere 16.1
2764 Male, age 80, right hemisphere 14.7
2613 Female, age 94, left hemisphere 14.6
Hippocampus, CA1
nTPM: 14.3
2045 Male, age 76, both hemispheres 15.7
2749 Male, age 80, left hemisphere 14.4
2527 Male, age 74, both hemispheres 14.3
2082 Female, age 91, right hemisphere 14.0
1873 Female, age 85, both hemispheres 12.8
Hippocampus, CA2
nTPM: 15.0
1940 Female, age 85, left hemisphere 15.9
2113 Female, age 91, right hemisphere 15.6
1892 Male, age 76, both hemispheres 15.3
2437 Female, age 94, left hemisphere 14.5
2249 Male, age 74, both hemispheres 14.3
1963 Male, age 80, left hemisphere 14.2
Hippocampus, CA3
nTPM: 14.6
2620 Female, age 94, left hemisphere 16.7
1891 Female, age 85, both hemispheres 16.5
2861 Female, age 67, both hemispheres 15.2
1867 Male, age 76, both hemispheres 14.0
2137 Male, age 80, left hemisphere 13.8
2436 Male, age 74, both hemispheres 11.4
Parahippocampal cortex
nTPM: 16.5
1850 Male, age 80, both hemispheres 18.7
2622 Female, age 67, right hemisphere 18.5
2532 Female, age 72, left hemisphere 17.8
1933 Female, age 85, both hemispheres 16.6
2693 Female, age 94, both hemispheres 16.3
2245 Female, age 91, both hemispheres 16.2
2692 Male, age 74, both hemispheres 16.2
2018 Male, age 76, both hemispheres 14.9
1990 Female, age 91, right hemisphere 14.8
2250 Female, age 67, right hemisphere 14.7
Perirhinal gyrus
nTPM: 16.5
1794 Male, age 80, right hemisphere 19.3
1841 Female, age 85, right hemisphere 16.8
1847 Female, age 91, left hemisphere 16.3
2848 Male, age 76, right hemisphere 16.3
2521 Female, age 94, right hemisphere 14.2
Subiculum
nTPM: 16.9
2438 Female, age 94, left hemisphere 24.9
1977 Female, age 85, both hemispheres 15.8
2619 Male, age 74, both hemispheres 15.8
1901 Male, age 80, both hemispheres 15.4
2042 Male, age 76, both hemispheres 15.3
2729 Female, age 91, right hemisphere 14.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.1
Samples: 197

Max nTPM: 22.3
Min nTPM: 6.6
Std nTPM: 2.8
Median nTPM: 11.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 22.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 19.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 18.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 18.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 18.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 18.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 18.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 18.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 18.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 17.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.7
FF:10153-102I9 76 years, female 15.9
FF:10169-103B7 60 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.0
Pig sample Sample description nTPM
Subiculum
nTPM: 10.3
Samples: 4

Max nTPM: 12.6
Min nTPM: 9.3
Sample A Female 12.6
Sample B Female 9.4
Sample C Male 9.3
Sample D Male 9.9
Dorsal hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 9.9
Min nTPM: 9.4
Sample A Female 9.5
Sample B Female 9.9
Sample C Male 9.6
Sample D Male 9.4
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 12.3
Min nTPM: 10.5
Sample A Female 10.7
Sample B Female 12.3
Sample C Male 10.7
Sample D Male 10.5
Ventral hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.8
Sample A Female 9.0
Sample B Female 9.4
Sample C Male 7.8
Sample D Male 8.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.7
Samples: 4

Max nTPM: 34.4
Min nTPM: 28.4
Sample A Male 30.3
Sample B Male 34.4
Sample C Female 29.8
Sample D Female 28.4
Hippocampal formation
nTPM: 30.6
Samples: 4

Max nTPM: 33.8
Min nTPM: 26.4
Sample A Male 33.8
Sample B Male 30.7
Sample C Female 31.5
Sample D Female 26.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69028462 Antisense, RP_050316_01_D03, Mouse strain C57BL/6J (56 days, male) 0.3

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