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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
70.0
nTPM
Monaco:
32.3
nTPM
Schmiedel:
35.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.0
HPA sample
nTPM
gdT-cell nTPM: 54.8
Samples: 6
Max nTPM: 64.6
Min nTPM: 45.7
P10809_1007
45.7
P10809_1022
59.9
P10809_1041
52.3
P10809_1060
60.3
P10809_1077
46.2
P10809_1098
64.6
MAIT T-cell nTPM: 50.8
Samples: 6
Max nTPM: 70.6
Min nTPM: 25.7
P10809_1006
35.3
P10809_1024
70.6
P10809_1043
57.1
P10809_1062
65.4
P10809_1083
25.7
P10809_1097
50.6
Memory CD4 T-cell nTPM: 54.7
Samples: 6
Max nTPM: 60.5
Min nTPM: 37.6
P10809_1014
37.6
P10809_1026
57.9
P10809_1045
60.5
P10809_1064
60.3
P10809_1086
52.9
P10809_1113
59.2
Memory CD8 T-cell nTPM: 54.3
Samples: 5
Max nTPM: 62.8
Min nTPM: 37.7
P10809_1012
37.7
P10809_1027
59.5
P10809_1046
61.9
P10809_1065
49.5
P10809_1111
62.8
Naive CD4 T-cell nTPM: 49.6
Samples: 6
Max nTPM: 75.6
Min nTPM: 26.9
P10809_1015
26.9
P10809_1030
48.9
P10809_1049
75.6
P10809_1068
46.3
P10809_1085
54.9
P10809_1112
45.1
Naive CD8 T-cell nTPM: 52.1
Samples: 6
Max nTPM: 75.0
Min nTPM: 31.1
P10809_1016
31.1
P10809_1031
75.0
P10809_1050
55.7
P10809_1069
59.1
P10809_1087
47.7
P10809_1110
44.2
T-reg nTPM: 70.0
Samples: 6
Max nTPM: 90.0
Min nTPM: 39.2
P10809_1018
39.2
P10809_1037
75.9
P10809_1056
64.5
P10809_1075
67.5
P10809_1094
90.0
P10809_1106
82.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 14.8
Samples: 4
Max nTPM: 17.4
Min nTPM: 12.0
RHH5202_R3573
12.0
RHH5230_R3602
12.6
RHH5259_R3631
17.4
RHH5288_R3660
17.2
Effector memory CD8 T-cell nTPM: 19.9
Samples: 4
Max nTPM: 32.0
Min nTPM: 8.1
RHH5203_R3574
23.8
RHH5231_R3603
32.0
RHH5260_R3632
15.8
RHH5289_R3661
8.1
MAIT T-cell nTPM: 23.1
Samples: 4
Max nTPM: 32.5
Min nTPM: 13.7
RHH5233_R3605
20.2
RHH5205_R3576
13.7
RHH5262_R3634
32.5
RHH5297_R3663
25.9
Memory CD4 T-cell TFH nTPM: 23.0
Samples: 4
Max nTPM: 27.6
Min nTPM: 16.5
RHH5300_R3666
20.3
RHH5236_R3608
27.5
RHH5265_R3637
16.5
RHH5208_R3579
27.6
Memory CD4 T-cell Th1 nTPM: 20.5
Samples: 4
Max nTPM: 32.8
Min nTPM: 14.0
RHH5210_R3581
14.0
RHH5302_R3668
32.8
RHH5238_R3610
16.0
RHH5267_R3639
19.2
Memory CD4 T-cell Th1/Th17 nTPM: 24.0
Samples: 4
Max nTPM: 35.8
Min nTPM: 8.7
RHH5303_R3669
32.3
RHH5211_R3582
35.8
RHH5239_R3611
8.7
RHH5268_R3640
19.1
Memory CD4 T-cell Th17 nTPM: 13.0
Samples: 4
Max nTPM: 18.2
Min nTPM: 8.3
RHH5304_R3670
12.5
RHH5212_R3583
18.2
RHH5240_R3612
8.3
RHH5269_R3641
12.9
Memory CD4 T-cell Th2 nTPM: 19.2
Samples: 4
Max nTPM: 24.9
Min nTPM: 14.7
RHH5305_R3671
19.5
RHH5213_R3584
17.7
RHH5241_R3613
24.9
RHH5270_R3642
14.7
Naive CD4 T-cell nTPM: 15.2
Samples: 4
Max nTPM: 18.2
Min nTPM: 8.9
RHH5306_R3672
18.0
RHH5214_R3585
18.2
RHH5242_R3614
15.7
RHH5271_R3643
8.9
Naive CD8 T-cell nTPM: 13.8
Samples: 4
Max nTPM: 18.9
Min nTPM: 9.8
RHH5201_R3572
12.6
RHH5229_R3601
9.8
RHH5258_R3630
18.9
RHH5287_R3659
13.7
Non-Vd2 gdTCR nTPM: 24.2
Samples: 4
Max nTPM: 34.3
Min nTPM: 16.3
RHH5235_R3607
16.3
RHH5264_R3636
28.6
RHH5207_R3578
17.7
RHH5299_R3665
34.3
T-reg nTPM: 24.4
Samples: 4
Max nTPM: 37.7
Min nTPM: 16.5
RHH5301_R3667
37.7
RHH5237_R3609
25.1
RHH5266_R3638
16.5
RHH5209_R3580
18.3
Terminal effector memory CD4 T-cell nTPM: 19.2
Samples: 2
Max nTPM: 27.9
Min nTPM: 10.4
RHH5243_R3615
10.4
RHH5272_R3644
27.9
Terminal effector memory CD8 T-cell nTPM: 32.4
Samples: 4
Max nTPM: 64.0
Min nTPM: 13.5
RHH5232_R3604
13.5
RHH5204_R3575
64.0
RHH5261_R3633
27.8
RHH5296_R3662
24.1
Vd2 gdTCR nTPM: 28.7
Samples: 4
Max nTPM: 54.9
Min nTPM: 12.5
RHH5234_R3606
13.1
RHH5206_R3577
54.9
RHH5263_R3635
12.5
RHH5298_R3664
34.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
