We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
100.8
nTPM
Monaco:
73.4
nTPM
Schmiedel:
37.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
100.8
HPA sample
nTPM
gdT-cell nTPM: 71.3
Samples: 6
Max nTPM: 83.4
Min nTPM: 53.0
P10809_1007
53.0
P10809_1022
83.4
P10809_1041
81.5
P10809_1060
58.0
P10809_1077
71.4
P10809_1098
80.3
MAIT T-cell nTPM: 74.5
Samples: 6
Max nTPM: 88.4
Min nTPM: 62.6
P10809_1006
63.6
P10809_1024
83.4
P10809_1043
82.3
P10809_1062
62.6
P10809_1083
66.7
P10809_1097
88.4
Memory CD4 T-cell nTPM: 67.4
Samples: 6
Max nTPM: 88.4
Min nTPM: 44.2
P10809_1014
44.2
P10809_1026
88.4
P10809_1045
86.2
P10809_1064
54.9
P10809_1086
63.5
P10809_1113
67.2
Memory CD8 T-cell nTPM: 64.9
Samples: 5
Max nTPM: 80.6
Min nTPM: 51.9
P10809_1012
51.9
P10809_1027
71.3
P10809_1046
80.6
P10809_1065
52.9
P10809_1111
68.0
Naive CD4 T-cell nTPM: 52.9
Samples: 6
Max nTPM: 88.3
Min nTPM: 33.6
P10809_1015
33.6
P10809_1030
58.2
P10809_1049
88.3
P10809_1068
40.8
P10809_1085
46.9
P10809_1112
49.7
Naive CD8 T-cell nTPM: 57.1
Samples: 6
Max nTPM: 73.9
Min nTPM: 41.9
P10809_1016
53.2
P10809_1031
41.9
P10809_1050
64.1
P10809_1069
73.9
P10809_1087
58.3
P10809_1110
51.2
T-reg nTPM: 100.8
Samples: 6
Max nTPM: 187.2
Min nTPM: 62.3
P10809_1018
62.3
P10809_1037
80.4
P10809_1056
187.2
P10809_1075
68.4
P10809_1094
108.9
P10809_1106
97.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 53.1
Samples: 4
Max nTPM: 70.4
Min nTPM: 40.6
RHH5202_R3573
70.4
RHH5230_R3602
43.6
RHH5259_R3631
40.6
RHH5288_R3660
57.7
Effector memory CD8 T-cell nTPM: 73.4
Samples: 4
Max nTPM: 112.6
Min nTPM: 37.2
RHH5203_R3574
112.6
RHH5231_R3603
90.2
RHH5260_R3632
37.2
RHH5289_R3661
53.4
MAIT T-cell nTPM: 58.1
Samples: 4
Max nTPM: 67.8
Min nTPM: 50.4
RHH5233_R3605
67.8
RHH5205_R3576
50.4
RHH5262_R3634
51.4
RHH5297_R3663
62.8
Memory CD4 T-cell TFH nTPM: 56.7
Samples: 4
Max nTPM: 75.5
Min nTPM: 44.0
RHH5300_R3666
57.0
RHH5236_R3608
75.5
RHH5265_R3637
44.0
RHH5208_R3579
50.3
Memory CD4 T-cell Th1 nTPM: 48.5
Samples: 4
Max nTPM: 65.8
Min nTPM: 30.7
RHH5210_R3581
50.7
RHH5302_R3668
65.8
RHH5238_R3610
30.7
RHH5267_R3639
46.9
Memory CD4 T-cell Th1/Th17 nTPM: 49.2
Samples: 4
Max nTPM: 74.4
Min nTPM: 29.5
RHH5303_R3669
62.7
RHH5211_R3582
74.4
RHH5239_R3611
29.5
RHH5268_R3640
30.3
Memory CD4 T-cell Th17 nTPM: 37.5
Samples: 4
Max nTPM: 50.7
Min nTPM: 25.4
RHH5304_R3670
50.7
RHH5212_R3583
47.0
RHH5240_R3612
25.4
RHH5269_R3641
26.9
Memory CD4 T-cell Th2 nTPM: 54.0
Samples: 4
Max nTPM: 67.1
Min nTPM: 44.0
RHH5305_R3671
51.6
RHH5213_R3584
53.2
RHH5241_R3613
67.1
RHH5270_R3642
44.0
Naive CD4 T-cell nTPM: 43.4
Samples: 4
Max nTPM: 49.8
Min nTPM: 34.4
RHH5306_R3672
49.8
RHH5214_R3585
49.4
RHH5242_R3614
39.9
RHH5271_R3643
34.4
Naive CD8 T-cell nTPM: 49.3
Samples: 4
Max nTPM: 67.8
Min nTPM: 17.2
RHH5201_R3572
67.8
RHH5229_R3601
17.2
RHH5258_R3630
59.8
RHH5287_R3659
52.2
Non-Vd2 gdTCR nTPM: 68.6
Samples: 4
Max nTPM: 96.1
Min nTPM: 36.8
RHH5235_R3607
36.8
RHH5264_R3636
96.1
RHH5207_R3578
57.1
RHH5299_R3665
84.4
T-reg nTPM: 44.7
Samples: 4
Max nTPM: 53.6
Min nTPM: 33.1
RHH5301_R3667
52.4
RHH5237_R3609
53.6
RHH5266_R3638
33.1
RHH5209_R3580
39.8
Terminal effector memory CD4 T-cell nTPM: 60.8
Samples: 2
Max nTPM: 81.8
Min nTPM: 39.7
RHH5243_R3615
39.7
RHH5272_R3644
81.8
Terminal effector memory CD8 T-cell nTPM: 73.1
Samples: 4
Max nTPM: 109.2
Min nTPM: 33.1
RHH5232_R3604
66.8
RHH5204_R3575
109.2
RHH5261_R3633
33.1
RHH5296_R3662
83.1
Vd2 gdTCR nTPM: 64.6
Samples: 4
Max nTPM: 80.9
Min nTPM: 34.1
RHH5234_R3606
65.7
RHH5206_R3577
77.8
RHH5263_R3635
34.1
RHH5298_R3664
80.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
