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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
137.0
nTPM
HPA Brain:
253.3
nTPM
GTEx:
137.0
nTPM
FANTOM5:
395.0
Scaled Tags Per Million
Pig:
1.2
nTPM
Mouse:
8.2
nTPM
Allen mouse:
0.2
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
253.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 172.1
2411
Female, age 72, unknown
240.5
2019
Male, age 18, unknown
215.6
1830
Male, age 51, unknown
212.4
1833
Male, age 53, unknown
192.2
1870
Female, age 42, unknown
187.4
2586
Male, age 75, left hemisphere
163.3
2828
Female, age 72, unknown
161.8
2666
Male, age 74, left hemisphere
125.6
1827
Male, age 72, unknown
115.7
2219
Male, age 76, both hemispheres
106.1
Dorsal raphe nucleus nTPM: 122.3
2750
Male, age 76, both hemispheres
264.7
2016
Female, age 72, unknown
122.9
1828
Male, age 53, unknown
106.6
2047
Male, age 72, unknown
64.2
2298
Female, age 72, unknown
53.2
Inferior colliculus nTPM: 87.8
1890
Male, age 53, unknown
104.8
1848
Female, age 42, unknown
90.2
2849
Male, age 72, unknown
82.7
2097
Female, age 72, unknown
73.7
Median raphe nucleus nTPM: 91.8
2220
Male, age 76, midline
91.8
Periaquaductal grey, anterior nTPM: 71.5
1947
Male, age 18, unknown
86.9
1795
Male, age 51, unknown
71.5
2502
Female, age 75, unknown
56.1
Periaquaductal grey, dorsal nTPM: 60.5
2464
Female, age 72, unknown
110.5
1831
Male, age 72, unknown
77.2
1840
Male, age 53, unknown
30.0
2850
Male, age 76, both hemispheres
24.3
Periaquaductal grey, lateral nTPM: 68.2
2272
Male, age 74, both hemispheres
92.8
2053
Male, age 18, unknown
79.8
2140
Male, age 76, both hemispheres
31.9
Pretectal area nTPM: 93.0
2316
Male, age 76, right hemisphere
151.7
1815
Male, age 53, unknown
134.3
2407
Male, age 75, both hemispheres
133.8
2007
Male, age 72, unknown
113.2
1817
Female, age 42, unknown
92.4
2825
Male, age 18, unknown
88.8
2273
Male, age 74, both hemispheres
81.7
2224
Female, age 72, unknown
70.5
1944
Female, age 72, unknown
56.0
2667
Female, age 75, unknown
53.4
1816
Male, age 51, unknown
47.5
Red nucleus nTPM: 253.3
2823
Male, age 76, right hemisphere
337.5
1904
Male, age 53, unknown
281.5
2769
Male, age 72, unknown
274.8
2227
Male, age 72, unknown
270.9
1865
Male, age 51, unknown
259.9
2588
Male, age 74, left hemisphere
254.7
1821
Female, age 72, unknown
251.7
2785
Male, age 18, unknown
241.5
2725
Female, age 75, unknown
240.9
2503
Female, age 72, unknown
240.6
2584
Male, age 75, left hemisphere
197.2
1954
Female, age 42, unknown
188.0
Substantia nigra nTPM: 119.2
2583
Male, age 75, right hemisphere
194.1
2590
Female, age 75, unknown
182.3
1851
Male, age 51, unknown
149.0
1889
Female, age 72, unknown
133.6
2409
Female, age 72, unknown
108.8
2699
Male, age 18, unknown
105.0
1941
Male, age 53, unknown
99.5
1916
Female, age 42, unknown
79.5
2665
Male, age 74, both hemispheres
72.7
2241
Male, age 72, unknown
67.2
Superior colliculus nTPM: 133.1
1913
Female, age 42, unknown
219.4
1995
Male, age 72, unknown
209.5
2668
Female, age 75, unknown
158.9
1895
Male, age 76, right hemisphere
153.2
2587
Male, age 74, left hemisphere
137.9
1839
Male, age 51, unknown
134.8
1796
Male, age 53, unknown
102.5
2664
Male, age 75, both hemispheres
83.0
2087
Female, age 72, unknown
67.2
2261
Male, age 18, unknown
64.4
Ventral tegmental area nTPM: 146.3
2223
Female, age 72, unknown
230.5
2410
Female, age 72, unknown
166.8
1942
Male, age 51, unknown
130.3
2021
Male, age 53, unknown
126.4
2218
Male, age 76, both hemispheres
124.6
1915
Female, age 42, unknown
99.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
137.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 137.0
Samples: 139
Max nTPM: 714.0
Min nTPM: 17.0
Std nTPM: 97.6
Median nTPM: 112.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
714.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
540.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
491.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
354.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
301.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
298.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
290.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
288.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
282.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
272.1
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
271.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
261.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
254.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
254.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
253.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
234.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
234.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
225.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
217.3
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
215.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
212.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
211.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
211.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
209.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
204.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
194.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
192.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
191.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
189.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
183.2
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
179.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
178.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
176.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
174.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
172.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
169.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
167.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
167.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
167.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
166.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
164.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
163.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
162.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
160.1
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
152.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
150.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
147.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
146.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
146.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
146.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
143.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
141.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
138.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
136.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
134.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
134.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
133.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
132.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
131.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
131.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
130.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
125.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
125.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
123.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
121.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
121.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
119.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
118.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
115.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
112.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
111.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
109.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
108.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
107.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
107.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
106.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
106.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
106.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
105.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
104.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
103.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
102.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
100.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
100.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
98.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
98.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
97.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
95.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
95.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
93.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
92.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
91.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
90.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
88.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
86.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
86.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
85.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
83.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
82.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
79.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
78.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
77.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
75.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
75.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
73.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
73.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
70.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
68.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
66.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
65.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
65.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
64.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
64.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
60.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
60.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
58.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
58.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
57.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
55.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
54.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
52.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
52.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
51.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
47.3
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
46.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
45.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
45.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
43.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
41.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
41.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
40.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
40.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
27.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
25.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
24.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
23.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
20.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
17.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
17.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
8.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 8.2
Samples: 4
Max nTPM: 10.3
Min nTPM: 7.3
Sample A
Male
10.3
Sample B
Male
7.3
Sample C
Female
7.3
Sample D
Female
7.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.