HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:7.0 nTPM
HPA Brain:25.0 nTPM
GTEx:7.0 nTPM
FANTOM5:27.7 Scaled Tags Per Million
Pig:12.2 nTPM
Mouse:12.1 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047164
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.0
Sample id Sample description nTPM
Hippocampus
nTPM: 25.0
2621 Female, age 67, right hemisphere 27.3
1911 Female, age 85, right hemisphere 26.1
1855 Male, age 76, left hemisphere 25.8
2529 Female, age 94, left hemisphere 24.9
2148 Female, age 91, left hemisphere 23.7
1898 Male, age 80, left hemisphere 22.3
Dentate gyrus
nTPM: 25.0
2531 Female, age 67, both hemispheres 30.5
2010 Male, age 76, both hemispheres 26.3
2246 Female, age 85, both hemispheres 24.3
2530 Female, age 94, left hemisphere 24.3
1927 Female, age 91, both hemispheres 24.2
2528 Male, age 74, both hemispheres 20.7
Entorhinal gyrus
nTPM: 23.4
1787 Male, age 76, left hemisphere 27.0
2764 Male, age 80, right hemisphere 25.7
2686 Male, age 75, right hemisphere 24.0
2613 Female, age 94, left hemisphere 22.5
1938 Female, age 85, left hemisphere 22.3
2117 Female, age 91, right hemisphere 18.8
Hippocampus, CA1
nTPM: 23.4
2045 Male, age 76, both hemispheres 26.7
2082 Female, age 91, right hemisphere 25.4
1873 Female, age 85, both hemispheres 24.5
2527 Male, age 74, both hemispheres 20.3
2749 Male, age 80, left hemisphere 20.2
Hippocampus, CA2
nTPM: 23.4
2113 Female, age 91, right hemisphere 24.4
1940 Female, age 85, left hemisphere 24.2
2437 Female, age 94, left hemisphere 24.2
1963 Male, age 80, left hemisphere 23.3
2249 Male, age 74, both hemispheres 22.3
1892 Male, age 76, both hemispheres 21.7
Hippocampus, CA3
nTPM: 23.5
2620 Female, age 94, left hemisphere 26.6
2861 Female, age 67, both hemispheres 25.4
1867 Male, age 76, both hemispheres 23.4
2436 Male, age 74, both hemispheres 22.4
1891 Female, age 85, both hemispheres 22.0
2137 Male, age 80, left hemisphere 20.9
Parahippocampal cortex
nTPM: 22.8
2018 Male, age 76, both hemispheres 29.1
2622 Female, age 67, right hemisphere 24.2
2692 Male, age 74, both hemispheres 23.8
2245 Female, age 91, both hemispheres 23.6
1990 Female, age 91, right hemisphere 22.9
2250 Female, age 67, right hemisphere 21.9
2693 Female, age 94, both hemispheres 21.8
2532 Female, age 72, left hemisphere 20.9
1933 Female, age 85, both hemispheres 20.1
1850 Male, age 80, both hemispheres 19.5
Perirhinal gyrus
nTPM: 20.9
2848 Male, age 76, right hemisphere 25.5
1794 Male, age 80, right hemisphere 20.4
2521 Female, age 94, right hemisphere 20.2
1847 Female, age 91, left hemisphere 20.1
1841 Female, age 85, right hemisphere 18.4
Subiculum
nTPM: 23.2
2042 Male, age 76, both hemispheres 26.6
1901 Male, age 80, both hemispheres 24.1
2438 Female, age 94, left hemisphere 23.4
2729 Female, age 91, right hemisphere 22.5
2619 Male, age 74, both hemispheres 22.3
1977 Female, age 85, both hemispheres 20.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.0
Samples: 197

Max nTPM: 21.9
Min nTPM: 3.1
Std nTPM: 2.1
Median nTPM: 6.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 21.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 16.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 12.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 12.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 12.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 12.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 11.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 11.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 11.2
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 10.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 10.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.7
FF:10153-102I9 76 years, female 36.8
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.2
Pig sample Sample description nTPM
Subiculum
nTPM: 11.8
Samples: 4

Max nTPM: 14.0
Min nTPM: 9.9
Sample A Female 14.0
Sample B Female 11.6
Sample C Male 9.9
Sample D Male 11.8
Dorsal hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.6
Sample A Female 12.8
Sample B Female 10.6
Sample C Male 11.1
Sample D Male 11.7
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 12.1
Min nTPM: 10.8
Sample A Female 11.8
Sample B Female 11.8
Sample C Male 12.1
Sample D Male 10.8
Ventral hippocampus
nTPM: 12.2
Samples: 4

Max nTPM: 14.0
Min nTPM: 10.6
Sample A Female 10.6
Sample B Female 10.9
Sample C Male 13.3
Sample D Male 14.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 13.0
Min nTPM: 9.5
Sample A Male 9.5
Sample B Male 12.6
Sample C Female 13.0
Sample D Female 10.2
Hippocampal formation
nTPM: 12.1
Samples: 4

Max nTPM: 14.5
Min nTPM: 9.9
Sample A Male 9.9
Sample B Male 10.6
Sample C Female 14.5
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68196962 Antisense, RP_040922_01_C09, Mouse strain C57BL/6J (56 days, male) 0.4

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