HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:16.8 nTPM
HPA Brain:52.3 nTPM
GTEx:16.8 nTPM
FANTOM5:55.1 Scaled Tags Per Million
Pig:20.1 nTPM
Mouse:30.4 nTPM
Allen mouse:12.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA078588
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.3
Sample id Sample description nTPM
Hippocampus
nTPM: 52.3
2621 Female, age 67, right hemisphere 60.2
2529 Female, age 94, left hemisphere 58.2
2148 Female, age 91, left hemisphere 53.9
1855 Male, age 76, left hemisphere 51.0
1911 Female, age 85, right hemisphere 45.3
1898 Male, age 80, left hemisphere 45.0
Dentate gyrus
nTPM: 49.2
2531 Female, age 67, both hemispheres 58.5
2530 Female, age 94, left hemisphere 54.3
1927 Female, age 91, both hemispheres 47.4
2528 Male, age 74, both hemispheres 45.7
2246 Female, age 85, both hemispheres 45.3
2010 Male, age 76, both hemispheres 43.9
Entorhinal gyrus
nTPM: 47.7
2613 Female, age 94, left hemisphere 53.6
2764 Male, age 80, right hemisphere 47.6
2117 Female, age 91, right hemisphere 47.1
1938 Female, age 85, left hemisphere 46.4
2686 Male, age 75, right hemisphere 46.4
1787 Male, age 76, left hemisphere 44.9
Hippocampus, CA1
nTPM: 46.8
2749 Male, age 80, left hemisphere 53.4
2527 Male, age 74, both hemispheres 51.4
1873 Female, age 85, both hemispheres 46.2
2082 Female, age 91, right hemisphere 43.3
2045 Male, age 76, both hemispheres 39.8
Hippocampus, CA2
nTPM: 46.1
1963 Male, age 80, left hemisphere 56.4
2437 Female, age 94, left hemisphere 51.6
2113 Female, age 91, right hemisphere 45.7
1940 Female, age 85, left hemisphere 42.2
1892 Male, age 76, both hemispheres 42.1
2249 Male, age 74, both hemispheres 38.7
Hippocampus, CA3
nTPM: 51.0
2861 Female, age 67, both hemispheres 67.4
2620 Female, age 94, left hemisphere 59.4
2137 Male, age 80, left hemisphere 55.7
2436 Male, age 74, both hemispheres 43.7
1891 Female, age 85, both hemispheres 40.6
1867 Male, age 76, both hemispheres 39.3
Parahippocampal cortex
nTPM: 46.6
2245 Female, age 91, both hemispheres 58.9
2622 Female, age 67, right hemisphere 52.9
2532 Female, age 72, left hemisphere 50.6
2250 Female, age 67, right hemisphere 47.1
2692 Male, age 74, both hemispheres 46.7
1933 Female, age 85, both hemispheres 45.3
2693 Female, age 94, both hemispheres 42.6
1990 Female, age 91, right hemisphere 41.6
1850 Male, age 80, both hemispheres 41.0
2018 Male, age 76, both hemispheres 38.9
Perirhinal gyrus
nTPM: 43.0
2521 Female, age 94, right hemisphere 45.7
1794 Male, age 80, right hemisphere 44.2
1847 Female, age 91, left hemisphere 42.4
2848 Male, age 76, right hemisphere 41.3
1841 Female, age 85, right hemisphere 41.2
Subiculum
nTPM: 46.2
2438 Female, age 94, left hemisphere 53.9
2042 Male, age 76, both hemispheres 45.9
2619 Male, age 74, both hemispheres 45.8
1901 Male, age 80, both hemispheres 44.9
2729 Female, age 91, right hemisphere 43.9
1977 Female, age 85, both hemispheres 42.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.8
Samples: 197

Max nTPM: 33.5
Min nTPM: 8.0
Std nTPM: 3.2
Median nTPM: 16.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 33.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 25.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 24.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 24.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 24.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 23.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 22.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 22.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 21.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 21.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 21.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.1
FF:10153-102I9 76 years, female 55.3
FF:10169-103B7 60 years, female 55.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.1
Pig sample Sample description nTPM
Subiculum
nTPM: 19.5
Samples: 4

Max nTPM: 25.4
Min nTPM: 15.2
Sample A Female 25.4
Sample B Female 16.5
Sample C Male 20.9
Sample D Male 15.2
Dorsal hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 21.3
Min nTPM: 13.7
Sample A Female 21.3
Sample B Female 19.7
Sample C Male 18.1
Sample D Male 13.7
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 22.2
Min nTPM: 16.7
Sample A Female 22.2
Sample B Female 16.7
Sample C Male 22.0
Sample D Male 18.3
Ventral hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 28.3
Min nTPM: 14.3
Sample A Female 16.8
Sample B Female 14.3
Sample C Male 28.3
Sample D Male 21.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.4
Samples: 4

Max nTPM: 36.6
Min nTPM: 27.3
Sample A Male 30.4
Sample B Male 27.3
Sample C Female 27.4
Sample D Female 36.6
Hippocampal formation
nTPM: 29.3
Samples: 4

Max nTPM: 35.4
Min nTPM: 22.8
Sample A Male 22.8
Sample B Male 32.9
Sample C Female 35.4
Sample D Female 26.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.2
68798633 Antisense, RP_050215_02_H11, Mouse strain C57BL/6J (56 days, male) 12.2

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