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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1379.5
nTPM
Monaco:
1434.6
nTPM
Schmiedel:
389.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1379.5
HPA sample
nTPM
gdT-cell nTPM: 1379.5
Samples: 6
Max nTPM: 1881.3
Min nTPM: 981.2
P10809_1007
1062.6
P10809_1022
1881.3
P10809_1041
1797.1
P10809_1060
1148.2
P10809_1077
1406.4
P10809_1098
981.2
MAIT T-cell nTPM: 871.1
Samples: 6
Max nTPM: 1101.3
Min nTPM: 653.3
P10809_1006
653.3
P10809_1024
1038.4
P10809_1043
1101.3
P10809_1062
936.1
P10809_1083
810.2
P10809_1097
687.3
Memory CD4 T-cell nTPM: 145.8
Samples: 6
Max nTPM: 265.6
Min nTPM: 45.3
P10809_1014
57.5
P10809_1026
101.8
P10809_1045
153.5
P10809_1064
251.1
P10809_1086
265.6
P10809_1113
45.3
Memory CD8 T-cell nTPM: 892.9
Samples: 5
Max nTPM: 1253.7
Min nTPM: 452.7
P10809_1012
575.0
P10809_1027
1118.8
P10809_1046
1253.7
P10809_1065
1064.5
P10809_1111
452.7
Naive CD4 T-cell nTPM: 86.3
Samples: 6
Max nTPM: 195.8
Min nTPM: 33.8
P10809_1015
38.8
P10809_1030
93.3
P10809_1049
82.4
P10809_1068
73.6
P10809_1085
195.8
P10809_1112
33.8
Naive CD8 T-cell nTPM: 638.1
Samples: 6
Max nTPM: 936.8
Min nTPM: 254.0
P10809_1016
254.0
P10809_1031
661.0
P10809_1050
802.4
P10809_1069
872.8
P10809_1087
936.8
P10809_1110
301.6
T-reg nTPM: 23.8
Samples: 6
Max nTPM: 47.2
Min nTPM: 11.4
P10809_1018
11.4
P10809_1037
27.1
P10809_1056
24.5
P10809_1075
19.5
P10809_1094
47.2
P10809_1106
12.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1434.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 253.7
Samples: 4
Max nTPM: 477.2
Min nTPM: 57.1
RHH5202_R3573
57.1
RHH5230_R3602
272.5
RHH5259_R3631
207.9
RHH5288_R3660
477.2
Effector memory CD8 T-cell nTPM: 715.2
Samples: 4
Max nTPM: 1116.4
Min nTPM: 236.8
RHH5203_R3574
236.8
RHH5231_R3603
934.5
RHH5260_R3632
573.1
RHH5289_R3661
1116.4
MAIT T-cell nTPM: 636.4
Samples: 4
Max nTPM: 932.3
Min nTPM: 158.4
RHH5233_R3605
750.8
RHH5205_R3576
158.4
RHH5262_R3634
704.1
RHH5297_R3663
932.3
Memory CD4 T-cell TFH nTPM: 26.9
Samples: 4
Max nTPM: 37.6
Min nTPM: 13.2
RHH5300_R3666
37.6
RHH5236_R3608
32.8
RHH5265_R3637
24.0
RHH5208_R3579
13.2
Memory CD4 T-cell Th1 nTPM: 66.3
Samples: 4
Max nTPM: 98.4
Min nTPM: 30.1
RHH5210_R3581
30.1
RHH5302_R3668
98.4
RHH5238_R3610
81.1
RHH5267_R3639
55.7
Memory CD4 T-cell Th1/Th17 nTPM: 84.1
Samples: 4
Max nTPM: 198.5
Min nTPM: 25.7
RHH5303_R3669
198.5
RHH5211_R3582
25.7
RHH5239_R3611
39.6
RHH5268_R3640
72.4
Memory CD4 T-cell Th17 nTPM: 46.3
Samples: 4
Max nTPM: 107.8
Min nTPM: 15.2
RHH5304_R3670
107.8
RHH5212_R3583
15.2
RHH5240_R3612
24.4
RHH5269_R3641
37.8
Memory CD4 T-cell Th2 nTPM: 32.1
Samples: 4
Max nTPM: 42.1
Min nTPM: 21.5
RHH5305_R3671
38.3
RHH5213_R3584
21.5
RHH5241_R3613
42.1
RHH5270_R3642
26.4
Naive CD4 T-cell nTPM: 42.7
Samples: 4
Max nTPM: 67.7
Min nTPM: 17.5
RHH5306_R3672
67.7
RHH5214_R3585
17.5
RHH5242_R3614
64.5
RHH5271_R3643
20.9
Naive CD8 T-cell nTPM: 162.1
Samples: 4
Max nTPM: 260.2
Min nTPM: 18.9
RHH5201_R3572
18.9
RHH5229_R3601
132.7
RHH5258_R3630
260.2
RHH5287_R3659
236.5
Non-Vd2 gdTCR nTPM: 1434.6
Samples: 4
Max nTPM: 1997.0
Min nTPM: 844.7
RHH5235_R3607
844.7
RHH5264_R3636
1909.0
RHH5207_R3578
987.7
RHH5299_R3665
1997.0
T-reg nTPM: 33.9
Samples: 4
Max nTPM: 57.7
Min nTPM: 15.1
RHH5301_R3667
57.7
RHH5237_R3609
41.9
RHH5266_R3638
15.1
RHH5209_R3580
20.9
Terminal effector memory CD4 T-cell nTPM: 611.2
Samples: 2
Max nTPM: 674.6
Min nTPM: 547.8
RHH5243_R3615
674.6
RHH5272_R3644
547.8
Terminal effector memory CD8 T-cell nTPM: 1369.7
Samples: 4
Max nTPM: 1653.2
Min nTPM: 1085.0
RHH5232_R3604
1546.5
RHH5204_R3575
1085.0
RHH5261_R3633
1194.0
RHH5296_R3662
1653.2
Vd2 gdTCR nTPM: 991.4
Samples: 4
Max nTPM: 1176.1
Min nTPM: 688.0
RHH5234_R3606
1115.4
RHH5206_R3577
986.0
RHH5263_R3635
688.0
RHH5298_R3664
1176.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
