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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
124.2
nTPM
Monaco:
30.4
nTPM
Schmiedel:
27.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
124.2
HPA sample
nTPM
gdT-cell nTPM: 71.6
Samples: 6
Max nTPM: 88.6
Min nTPM: 35.5
P10809_1007
35.5
P10809_1022
74.4
P10809_1041
88.6
P10809_1060
73.4
P10809_1077
82.2
P10809_1098
75.3
MAIT T-cell nTPM: 78.9
Samples: 6
Max nTPM: 96.0
Min nTPM: 41.8
P10809_1006
41.8
P10809_1024
77.2
P10809_1043
89.4
P10809_1062
96.0
P10809_1083
84.6
P10809_1097
84.6
Memory CD4 T-cell nTPM: 84.4
Samples: 6
Max nTPM: 115.9
Min nTPM: 56.3
P10809_1014
56.3
P10809_1026
85.3
P10809_1045
83.5
P10809_1064
115.9
P10809_1086
79.2
P10809_1113
86.4
Memory CD8 T-cell nTPM: 80.6
Samples: 5
Max nTPM: 96.4
Min nTPM: 59.0
P10809_1012
59.0
P10809_1027
96.4
P10809_1046
85.4
P10809_1065
91.1
P10809_1111
71.2
Naive CD4 T-cell nTPM: 85.9
Samples: 6
Max nTPM: 116.2
Min nTPM: 46.1
P10809_1015
46.1
P10809_1030
91.9
P10809_1049
116.2
P10809_1068
106.6
P10809_1085
75.3
P10809_1112
79.1
Naive CD8 T-cell nTPM: 80.8
Samples: 6
Max nTPM: 112.6
Min nTPM: 58.3
P10809_1016
58.3
P10809_1031
86.4
P10809_1050
81.5
P10809_1069
112.6
P10809_1087
71.1
P10809_1110
75.1
T-reg nTPM: 124.3
Samples: 6
Max nTPM: 181.6
Min nTPM: 61.6
P10809_1018
61.6
P10809_1037
111.3
P10809_1056
181.6
P10809_1075
151.0
P10809_1094
100.1
P10809_1106
139.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.2
Samples: 4
Max nTPM: 29.9
Min nTPM: 5.7
RHH5202_R3573
5.7
RHH5230_R3602
17.4
RHH5259_R3631
15.9
RHH5288_R3660
29.9
Effector memory CD8 T-cell nTPM: 9.4
Samples: 4
Max nTPM: 13.3
Min nTPM: 3.7
RHH5203_R3574
12.8
RHH5231_R3603
3.7
RHH5260_R3632
13.3
RHH5289_R3661
7.6
MAIT T-cell nTPM: 13.9
Samples: 4
Max nTPM: 25.5
Min nTPM: 1.1
RHH5233_R3605
8.1
RHH5205_R3576
1.1
RHH5262_R3634
20.9
RHH5297_R3663
25.5
Memory CD4 T-cell TFH nTPM: 19.6
Samples: 4
Max nTPM: 32.3
Min nTPM: 12.6
RHH5300_R3666
32.3
RHH5236_R3608
17.3
RHH5265_R3637
12.6
RHH5208_R3579
16.3
Memory CD4 T-cell Th1 nTPM: 19.1
Samples: 4
Max nTPM: 38.5
Min nTPM: 8.8
RHH5210_R3581
8.8
RHH5302_R3668
38.5
RHH5238_R3610
17.0
RHH5267_R3639
11.9
Memory CD4 T-cell Th1/Th17 nTPM: 21.3
Samples: 4
Max nTPM: 33.8
Min nTPM: 10.0
RHH5303_R3669
33.8
RHH5211_R3582
22.5
RHH5239_R3611
10.0
RHH5268_R3640
18.8
Memory CD4 T-cell Th17 nTPM: 10.8
Samples: 4
Max nTPM: 15.3
Min nTPM: 3.7
RHH5304_R3670
10.8
RHH5212_R3583
13.2
RHH5240_R3612
15.3
RHH5269_R3641
3.7
Memory CD4 T-cell Th2 nTPM: 16.8
Samples: 4
Max nTPM: 23.2
Min nTPM: 11.9
RHH5305_R3671
23.2
RHH5213_R3584
11.9
RHH5241_R3613
19.9
RHH5270_R3642
12.1
Naive CD4 T-cell nTPM: 19.6
Samples: 4
Max nTPM: 24.2
Min nTPM: 10.5
RHH5306_R3672
21.9
RHH5214_R3585
21.9
RHH5242_R3614
10.5
RHH5271_R3643
24.2
Naive CD8 T-cell nTPM: 17.9
Samples: 4
Max nTPM: 26.3
Min nTPM: 3.6
RHH5201_R3572
3.6
RHH5229_R3601
26.3
RHH5258_R3630
19.1
RHH5287_R3659
22.7
Non-Vd2 gdTCR nTPM: 18.4
Samples: 4
Max nTPM: 27.2
Min nTPM: 7.7
RHH5235_R3607
12.9
RHH5264_R3636
27.2
RHH5207_R3578
7.7
RHH5299_R3665
25.8
T-reg nTPM: 22.1
Samples: 4
Max nTPM: 38.0
Min nTPM: 12.4
RHH5301_R3667
38.0
RHH5237_R3609
16.8
RHH5266_R3638
12.4
RHH5209_R3580
21.0
Terminal effector memory CD4 T-cell nTPM: 18.1
Samples: 2
Max nTPM: 28.7
Min nTPM: 7.4
RHH5243_R3615
7.4
RHH5272_R3644
28.7
Terminal effector memory CD8 T-cell nTPM: 25.1
Samples: 4
Max nTPM: 29.0
Min nTPM: 23.2
RHH5232_R3604
23.4
RHH5204_R3575
23.2
RHH5261_R3633
24.6
RHH5296_R3662
29.0
Vd2 gdTCR nTPM: 30.4
Samples: 4
Max nTPM: 47.2
Min nTPM: 12.3
RHH5234_R3606
12.3
RHH5206_R3577
33.5
RHH5263_R3635
28.6
RHH5298_R3664
47.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
