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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.0
nTPM
Monaco:
238.4
nTPM
Schmiedel:
212.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.0
HPA sample
nTPM
gdT-cell nTPM: 27.4
Samples: 6
Max nTPM: 49.3
Min nTPM: 17.4
P10809_1007
31.1
P10809_1022
49.3
P10809_1041
21.0
P10809_1060
17.4
P10809_1077
25.1
P10809_1098
20.2
MAIT T-cell nTPM: 32.5
Samples: 6
Max nTPM: 55.3
Min nTPM: 9.8
P10809_1006
36.0
P10809_1024
55.3
P10809_1043
23.1
P10809_1062
36.6
P10809_1083
33.9
P10809_1097
9.8
Memory CD4 T-cell nTPM: 32.5
Samples: 6
Max nTPM: 56.1
Min nTPM: 21.7
P10809_1014
31.5
P10809_1026
22.0
P10809_1045
30.1
P10809_1064
33.4
P10809_1086
56.1
P10809_1113
21.7
Memory CD8 T-cell nTPM: 48.9
Samples: 5
Max nTPM: 60.7
Min nTPM: 40.6
P10809_1012
49.0
P10809_1027
46.7
P10809_1046
47.4
P10809_1065
60.7
P10809_1111
40.6
Naive CD4 T-cell nTPM: 30.6
Samples: 6
Max nTPM: 41.7
Min nTPM: 20.3
P10809_1015
29.1
P10809_1030
20.3
P10809_1049
28.6
P10809_1068
41.7
P10809_1085
35.7
P10809_1112
27.9
Naive CD8 T-cell nTPM: 57.0
Samples: 6
Max nTPM: 82.9
Min nTPM: 45.2
P10809_1016
60.3
P10809_1031
45.2
P10809_1050
45.5
P10809_1069
55.9
P10809_1087
82.9
P10809_1110
52.2
T-reg nTPM: 1.8
Samples: 6
Max nTPM: 4.0
Min nTPM: 0.0
P10809_1018
2.2
P10809_1037
1.7
P10809_1056
0.0
P10809_1075
1.5
P10809_1094
4.0
P10809_1106
1.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
238.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 172.4
Samples: 4
Max nTPM: 191.7
Min nTPM: 156.9
RHH5202_R3573
191.7
RHH5230_R3602
166.6
RHH5259_R3631
174.2
RHH5288_R3660
156.9
Effector memory CD8 T-cell nTPM: 219.1
Samples: 4
Max nTPM: 225.4
Min nTPM: 210.8
RHH5203_R3574
225.4
RHH5231_R3603
223.6
RHH5260_R3632
216.7
RHH5289_R3661
210.8
MAIT T-cell nTPM: 133.2
Samples: 4
Max nTPM: 162.8
Min nTPM: 82.7
RHH5233_R3605
162.8
RHH5205_R3576
151.6
RHH5262_R3634
135.7
RHH5297_R3663
82.7
Memory CD4 T-cell TFH nTPM: 92.0
Samples: 4
Max nTPM: 97.1
Min nTPM: 87.6
RHH5300_R3666
88.3
RHH5236_R3608
97.1
RHH5265_R3637
87.6
RHH5208_R3579
94.9
Memory CD4 T-cell Th1 nTPM: 118.5
Samples: 4
Max nTPM: 145.6
Min nTPM: 93.4
RHH5210_R3581
145.6
RHH5302_R3668
93.4
RHH5238_R3610
128.8
RHH5267_R3639
106.3
Memory CD4 T-cell Th1/Th17 nTPM: 127.6
Samples: 4
Max nTPM: 165.8
Min nTPM: 108.0
RHH5303_R3669
108.0
RHH5211_R3582
120.1
RHH5239_R3611
165.8
RHH5268_R3640
116.5
Memory CD4 T-cell Th17 nTPM: 132.4
Samples: 4
Max nTPM: 147.2
Min nTPM: 114.3
RHH5304_R3670
125.6
RHH5212_R3583
114.3
RHH5240_R3612
142.3
RHH5269_R3641
147.2
Memory CD4 T-cell Th2 nTPM: 110.2
Samples: 4
Max nTPM: 130.4
Min nTPM: 86.9
RHH5305_R3671
86.9
RHH5213_R3584
130.4
RHH5241_R3613
129.6
RHH5270_R3642
93.9
Naive CD4 T-cell nTPM: 118.4
Samples: 4
Max nTPM: 147.5
Min nTPM: 98.2
RHH5306_R3672
107.3
RHH5214_R3585
98.2
RHH5242_R3614
120.6
RHH5271_R3643
147.5
Naive CD8 T-cell nTPM: 238.4
Samples: 4
Max nTPM: 276.7
Min nTPM: 182.2
RHH5201_R3572
182.2
RHH5229_R3601
256.6
RHH5258_R3630
238.1
RHH5287_R3659
276.7
Non-Vd2 gdTCR nTPM: 41.2
Samples: 4
Max nTPM: 68.2
Min nTPM: 24.6
RHH5235_R3607
68.2
RHH5264_R3636
33.6
RHH5207_R3578
38.3
RHH5299_R3665
24.6
T-reg nTPM: 47.9
Samples: 4
Max nTPM: 56.7
Min nTPM: 40.0
RHH5301_R3667
40.3
RHH5237_R3609
54.7
RHH5266_R3638
40.0
RHH5209_R3580
56.7
Terminal effector memory CD4 T-cell nTPM: 177.3
Samples: 2
Max nTPM: 183.8
Min nTPM: 170.8
RHH5243_R3615
170.8
RHH5272_R3644
183.8
Terminal effector memory CD8 T-cell nTPM: 131.6
Samples: 4
Max nTPM: 212.5
Min nTPM: 55.1
RHH5232_R3604
171.6
RHH5204_R3575
87.3
RHH5261_R3633
55.1
RHH5296_R3662
212.5
Vd2 gdTCR nTPM: 147.6
Samples: 4
Max nTPM: 179.3
Min nTPM: 129.2
RHH5234_R3606
151.0
RHH5206_R3577
129.2
RHH5263_R3635
179.3
RHH5298_R3664
130.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
