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SLFN11
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  • SLFN11
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLFN11
Synonyms FLJ34922
Gene descriptioni

Full gene name according to HGNC.

Schlafen family member 11
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q12
Chromosome location (bp) 35350305 - 35373701
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000172716 (version 109)
Entrez gene 91607
HGNC HGNC:26633
UniProt Q7Z7L1 (UniProt - Evidence at protein level)
neXtProt NX_Q7Z7L1
GeneCards SLFN11
Antibodypedia SLFN11 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Inhibitor of DNA replication that promotes cell death in response to DNA damage 1, 2, 3. Acts as a guardian of the genome by killing cells with defective replication 4. Persistently blocks stressed replication forks by opening chromatin across replication initiation sites at stressed replication forks, possibly leading to unwind DNA ahead of the MCM helicase and block fork progression, ultimately leading to cell death 5. Acts independently of ATR 6. Also acts as an interferon (IFN)-induced antiviral protein which acts as an inhibitor of retrovirus protein synthesis 7. Specifically abrogates the production of retroviruses such as human immunodeficiency virus 1 (HIV-1) by acting as a specific inhibitor of the synthesis of retroviruses encoded proteins in a codon-usage-dependent manner 8. Binds to tRNAs and exploits the unique viral codon bias towards A/T nucleotides 9. The exact inhibition mechanism is unclear: may either sequester tRNAs, prevent their maturation via post-transcriptional processing or may accelerate their deacylation 10. Does not inhibit reverse transcription, integration or production and nuclear export of viral RNA 11.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Helicase, Hydrolase, RNA-binding, tRNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Antiviral defense, DNA damage, Immunity
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables tRNA binding activity. Involved in several processes, including defense response to virus; negative regulation of G1/S transition of mitotic cell cycle; and replication fork arrest. Located in cytosol; nucleoplasm; and site of DNA damage. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLFN11-201
ENSP00000312402
ENST00000308377
Q7Z7L1
[Direct mapping] Schlafen family member 11
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000049 [tRNA binding]
GO:0000166 [nucleotide binding]
GO:0002376 [immune system process]
GO:0003723 [RNA binding]
GO:0004386 [helicase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005829 [cytosol]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0008156 [negative regulation of DNA replication]
GO:0010942 [positive regulation of cell death]
GO:0016787 [hydrolase activity]
GO:0016887 [ATP hydrolysis activity]
GO:0043111 [replication fork arrest]
GO:0051607 [defense response to virus]
GO:0090734 [site of DNA damage]
GO:2000134 [negative regulation of G1/S transition of mitotic cell cycle]
Show all
901 aa
102.8 kDa
No 0
SLFN11-202
ENSP00000378067
ENST00000394566
Q7Z7L1
[Direct mapping] Schlafen family member 11
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000049 [tRNA binding]
GO:0000166 [nucleotide binding]
GO:0002376 [immune system process]
GO:0003723 [RNA binding]
GO:0004386 [helicase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005829 [cytosol]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0008156 [negative regulation of DNA replication]
GO:0010942 [positive regulation of cell death]
GO:0016787 [hydrolase activity]
GO:0016887 [ATP hydrolysis activity]
GO:0043111 [replication fork arrest]
GO:0051607 [defense response to virus]
GO:0090734 [site of DNA damage]
GO:2000134 [negative regulation of G1/S transition of mitotic cell cycle]
Show all
901 aa
102.8 kDa
No 0
SLFN11-203
ENSP00000395140
ENST00000427966
C9JDG6
[Direct mapping] Schlafen family member 11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
90 aa
10.1 kDa
No 0
SLFN11-204
ENSP00000397454
ENST00000430814
C9J902
[Direct mapping] Schlafen family member 11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
90 aa
10.1 kDa
No 0
SLFN11-205
ENSP00000393615
ENST00000441608
C9JUT2
[Direct mapping] Schlafen family member 11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
111 aa
12.7 kDa
No 0
SLFN11-208
ENSP00000468602
ENST00000588579
K7ES87
[Direct mapping] Schlafen family member 11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
80 aa
8.9 kDa
No 0
SLFN11-210
ENSP00000468095
ENST00000589811
K7ER38
[Direct mapping] Schlafen family member 11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
100 aa
11.2 kDa
No 0
SLFN11-211
ENSP00000464806
ENST00000591682
K7EIM3
[Direct mapping] Schlafen family member 11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
123 aa
14 kDa
No 0
SLFN11-212
ENSP00000465198
ENST00000592108
K7EJJ3
[Direct mapping] Schlafen family member 11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
50 aa
5.9 kDa
No 0
SLFN11-213
ENSP00000465777
ENST00000592122
K7EKT7
[Direct mapping] Schlafen family member 11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
48 aa
5.6 kDa
No 0
SLFN11-214
ENSP00000510787
ENST00000685675
Q7Z7L1
[Direct mapping] Schlafen family member 11
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000049 [tRNA binding]
GO:0000166 [nucleotide binding]
GO:0002376 [immune system process]
GO:0003723 [RNA binding]
GO:0004386 [helicase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005829 [cytosol]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0008156 [negative regulation of DNA replication]
GO:0010942 [positive regulation of cell death]
GO:0016787 [hydrolase activity]
GO:0016887 [ATP hydrolysis activity]
GO:0043111 [replication fork arrest]
GO:0051607 [defense response to virus]
GO:0090734 [site of DNA damage]
GO:2000134 [negative regulation of G1/S transition of mitotic cell cycle]
Show all
901 aa
102.8 kDa
No 0

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