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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2704.3
nTPM
Monaco:
3459.5
nTPM
Schmiedel:
459.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2704.3
HPA sample
nTPM
gdT-cell nTPM: 2541.4
Samples: 6
Max nTPM: 3519.1
Min nTPM: 1859.5
P10809_1007
2098.2
P10809_1022
3519.1
P10809_1041
3152.1
P10809_1060
1859.5
P10809_1077
2409.9
P10809_1098
2209.4
MAIT T-cell nTPM: 1969.2
Samples: 6
Max nTPM: 2348.9
Min nTPM: 1538.3
P10809_1006
1538.3
P10809_1024
2348.9
P10809_1043
2245.9
P10809_1062
1906.8
P10809_1083
1756.7
P10809_1097
2018.5
Memory CD4 T-cell nTPM: 1999.2
Samples: 6
Max nTPM: 2393.1
Min nTPM: 1500.2
P10809_1014
1500.2
P10809_1026
2393.1
P10809_1045
2200.8
P10809_1064
2134.1
P10809_1086
1915.5
P10809_1113
1851.3
Memory CD8 T-cell nTPM: 2297.4
Samples: 5
Max nTPM: 2869.1
Min nTPM: 1733.5
P10809_1012
1733.5
P10809_1027
2869.1
P10809_1046
2728.9
P10809_1065
2249.1
P10809_1111
1906.6
Naive CD4 T-cell nTPM: 1464.2
Samples: 6
Max nTPM: 1680.8
Min nTPM: 1098.7
P10809_1015
1098.7
P10809_1030
1650.5
P10809_1049
1680.8
P10809_1068
1355.9
P10809_1085
1580.3
P10809_1112
1418.8
Naive CD8 T-cell nTPM: 1911.6
Samples: 6
Max nTPM: 2258.0
Min nTPM: 1391.4
P10809_1016
1391.4
P10809_1031
2068.6
P10809_1050
2008.2
P10809_1069
2258.0
P10809_1087
2193.7
P10809_1110
1549.4
T-reg nTPM: 2704.3
Samples: 6
Max nTPM: 3265.7
Min nTPM: 2336.3
P10809_1018
2336.3
P10809_1037
2861.1
P10809_1056
3265.7
P10809_1075
2449.2
P10809_1094
2777.7
P10809_1106
2535.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3459.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1898.7
Samples: 4
Max nTPM: 2849.6
Min nTPM: 1268.8
RHH5202_R3573
2129.8
RHH5230_R3602
1346.5
RHH5259_R3631
1268.8
RHH5288_R3660
2849.6
Effector memory CD8 T-cell nTPM: 2273.1
Samples: 4
Max nTPM: 2831.0
Min nTPM: 1733.0
RHH5203_R3574
2831.0
RHH5231_R3603
2464.2
RHH5260_R3632
1733.0
RHH5289_R3661
2064.2
MAIT T-cell nTPM: 2083.6
Samples: 4
Max nTPM: 2670.5
Min nTPM: 1317.3
RHH5233_R3605
2463.7
RHH5205_R3576
1317.3
RHH5262_R3634
1882.8
RHH5297_R3663
2670.5
Memory CD4 T-cell TFH nTPM: 2531.8
Samples: 4
Max nTPM: 3021.7
Min nTPM: 2091.9
RHH5300_R3666
2300.8
RHH5236_R3608
3021.7
RHH5265_R3637
2091.9
RHH5208_R3579
2712.7
Memory CD4 T-cell Th1 nTPM: 2044.3
Samples: 4
Max nTPM: 3204.2
Min nTPM: 1500.6
RHH5210_R3581
1930.7
RHH5302_R3668
3204.2
RHH5238_R3610
1541.6
RHH5267_R3639
1500.6
Memory CD4 T-cell Th1/Th17 nTPM: 1996.6
Samples: 4
Max nTPM: 3066.4
Min nTPM: 895.7
RHH5303_R3669
3066.4
RHH5211_R3582
2564.0
RHH5239_R3611
895.7
RHH5268_R3640
1460.3
Memory CD4 T-cell Th17 nTPM: 1571.6
Samples: 4
Max nTPM: 2434.5
Min nTPM: 1173.7
RHH5304_R3670
1503.4
RHH5212_R3583
2434.5
RHH5240_R3612
1173.7
RHH5269_R3641
1174.6
Memory CD4 T-cell Th2 nTPM: 1934.4
Samples: 4
Max nTPM: 2650.0
Min nTPM: 1470.8
RHH5305_R3671
1986.2
RHH5213_R3584
1630.7
RHH5241_R3613
2650.0
RHH5270_R3642
1470.8
Naive CD4 T-cell nTPM: 1468.9
Samples: 4
Max nTPM: 1986.0
Min nTPM: 973.5
RHH5306_R3672
1573.9
RHH5214_R3585
1986.0
RHH5242_R3614
1342.0
RHH5271_R3643
973.5
Naive CD8 T-cell nTPM: 1394.7
Samples: 4
Max nTPM: 2011.8
Min nTPM: 787.9
RHH5201_R3572
1581.5
RHH5229_R3601
787.9
RHH5258_R3630
2011.8
RHH5287_R3659
1197.5
Non-Vd2 gdTCR nTPM: 3171.8
Samples: 4
Max nTPM: 4547.8
Min nTPM: 1564.0
RHH5235_R3607
1564.0
RHH5264_R3636
3852.0
RHH5207_R3578
2723.5
RHH5299_R3665
4547.8
T-reg nTPM: 1925.7
Samples: 4
Max nTPM: 2656.7
Min nTPM: 1196.8
RHH5301_R3667
2656.7
RHH5237_R3609
2470.5
RHH5266_R3638
1196.8
RHH5209_R3580
1378.6
Terminal effector memory CD4 T-cell nTPM: 2231.8
Samples: 2
Max nTPM: 3124.9
Min nTPM: 1338.7
RHH5243_R3615
1338.7
RHH5272_R3644
3124.9
Terminal effector memory CD8 T-cell nTPM: 3459.5
Samples: 4
Max nTPM: 4909.0
Min nTPM: 2117.9
RHH5232_R3604
2820.1
RHH5204_R3575
4909.0
RHH5261_R3633
2117.9
RHH5296_R3662
3990.9
Vd2 gdTCR nTPM: 2780.6
Samples: 4
Max nTPM: 4231.8
Min nTPM: 1461.5
RHH5234_R3606
2199.6
RHH5206_R3577
4231.8
RHH5263_R3635
1461.5
RHH5298_R3664
3229.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.