HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:74.0 nTPM
HPA Brain:107.7 nTPM
GTEx:74.0 nTPM
FANTOM5:73.0 Scaled Tags Per Million
Pig:44.8 nTPM
Mouse:40.9 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054382
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 107.7
Sample id Sample description nTPM
Hippocampus
nTPM: 101.1
2621 Female, age 67, right hemisphere 110.5
1855 Male, age 76, left hemisphere 108.3
1898 Male, age 80, left hemisphere 108.2
2529 Female, age 94, left hemisphere 102.1
1911 Female, age 85, right hemisphere 89.9
2148 Female, age 91, left hemisphere 87.7
Dentate gyrus
nTPM: 97.5
2530 Female, age 94, left hemisphere 111.0
2010 Male, age 76, both hemispheres 103.7
2246 Female, age 85, both hemispheres 94.9
1927 Female, age 91, both hemispheres 93.5
2531 Female, age 67, both hemispheres 92.4
2528 Male, age 74, both hemispheres 89.2
Entorhinal gyrus
nTPM: 107.7
1938 Female, age 85, left hemisphere 115.3
2686 Male, age 75, right hemisphere 111.7
2117 Female, age 91, right hemisphere 107.4
1787 Male, age 76, left hemisphere 105.6
2613 Female, age 94, left hemisphere 105.1
2764 Male, age 80, right hemisphere 101.2
Hippocampus, CA1
nTPM: 87.9
2082 Female, age 91, right hemisphere 102.1
1873 Female, age 85, both hemispheres 92.4
2527 Male, age 74, both hemispheres 85.0
2749 Male, age 80, left hemisphere 83.5
2045 Male, age 76, both hemispheres 76.5
Hippocampus, CA2
nTPM: 100.6
1963 Male, age 80, left hemisphere 112.5
1940 Female, age 85, left hemisphere 102.6
2249 Male, age 74, both hemispheres 99.8
2113 Female, age 91, right hemisphere 98.4
1892 Male, age 76, both hemispheres 96.2
2437 Female, age 94, left hemisphere 94.2
Hippocampus, CA3
nTPM: 88.8
1891 Female, age 85, both hemispheres 102.7
2436 Male, age 74, both hemispheres 94.4
1867 Male, age 76, both hemispheres 92.0
2861 Female, age 67, both hemispheres 85.7
2620 Female, age 94, left hemisphere 82.5
2137 Male, age 80, left hemisphere 75.5
Parahippocampal cortex
nTPM: 102.6
2532 Female, age 72, left hemisphere 114.5
1850 Male, age 80, both hemispheres 109.6
1990 Female, age 91, right hemisphere 106.4
2693 Female, age 94, both hemispheres 105.5
2018 Male, age 76, both hemispheres 100.6
2245 Female, age 91, both hemispheres 99.6
1933 Female, age 85, both hemispheres 98.8
2692 Male, age 74, both hemispheres 98.7
2250 Female, age 67, right hemisphere 97.2
2622 Female, age 67, right hemisphere 95.3
Perirhinal gyrus
nTPM: 98.5
1847 Female, age 91, left hemisphere 105.3
1841 Female, age 85, right hemisphere 103.2
2848 Male, age 76, right hemisphere 99.5
1794 Male, age 80, right hemisphere 98.6
2521 Female, age 94, right hemisphere 85.8
Subiculum
nTPM: 98.4
1977 Female, age 85, both hemispheres 104.1
2042 Male, age 76, both hemispheres 100.6
1901 Male, age 80, both hemispheres 99.7
2619 Male, age 74, both hemispheres 99.7
2729 Female, age 91, right hemisphere 97.2
2438 Female, age 94, left hemisphere 89.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.0
Samples: 197

Max nTPM: 128.1
Min nTPM: 48.5
Std nTPM: 13.0
Median nTPM: 72.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 128.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 110.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 105.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 104.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 103.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 102.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 101.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 101.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 101.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 101.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 100.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.0
FF:10153-102I9 76 years, female 74.5
FF:10169-103B7 60 years, female 71.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.8
Pig sample Sample description nTPM
Subiculum
nTPM: 41.9
Samples: 4

Max nTPM: 53.6
Min nTPM: 37.3
Sample A Female 53.6
Sample B Female 39.1
Sample C Male 37.3
Sample D Male 37.7
Dorsal hippocampus
nTPM: 44.8
Samples: 4

Max nTPM: 55.1
Min nTPM: 35.0
Sample A Female 55.1
Sample B Female 43.8
Sample C Male 45.4
Sample D Male 35.0
Entorhinal cortex
nTPM: 42.3
Samples: 4

Max nTPM: 45.6
Min nTPM: 35.8
Sample A Female 45.6
Sample B Female 44.9
Sample C Male 42.7
Sample D Male 35.8
Ventral hippocampus
nTPM: 43.4
Samples: 4

Max nTPM: 47.5
Min nTPM: 34.8
Sample A Female 45.4
Sample B Female 34.8
Sample C Male 47.5
Sample D Male 45.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.9
Samples: 4

Max nTPM: 48.0
Min nTPM: 37.0
Sample A Male 37.0
Sample B Male 48.0
Sample C Female 39.6
Sample D Female 39.1
Hippocampal formation
nTPM: 39.3
Samples: 4

Max nTPM: 40.4
Min nTPM: 38.5
Sample A Male 39.1
Sample B Male 39.3
Sample C Female 38.5
Sample D Female 40.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
583573 Antisense, RP_040831_02_G01, Mouse strain C57BL/6J (56 days, male) 6.8

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