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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
69.4
nTPM
Monaco:
178.6
nTPM
Schmiedel:
142.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.4
HPA sample
nTPM
gdT-cell nTPM: 47.7
Samples: 6
Max nTPM: 58.6
Min nTPM: 30.6
P10809_1007
30.6
P10809_1022
58.6
P10809_1041
42.2
P10809_1060
46.5
P10809_1077
52.1
P10809_1098
56.0
MAIT T-cell nTPM: 46.9
Samples: 6
Max nTPM: 63.3
Min nTPM: 33.7
P10809_1006
41.3
P10809_1024
63.3
P10809_1043
61.2
P10809_1062
38.6
P10809_1083
43.0
P10809_1097
33.7
Memory CD4 T-cell nTPM: 45.9
Samples: 6
Max nTPM: 58.4
Min nTPM: 36.5
P10809_1014
36.5
P10809_1026
49.7
P10809_1045
58.4
P10809_1064
40.7
P10809_1086
46.0
P10809_1113
44.2
Memory CD8 T-cell nTPM: 44.7
Samples: 5
Max nTPM: 59.8
Min nTPM: 32.2
P10809_1012
32.2
P10809_1027
59.8
P10809_1046
43.5
P10809_1065
38.5
P10809_1111
49.5
Naive CD4 T-cell nTPM: 47.1
Samples: 6
Max nTPM: 60.0
Min nTPM: 33.3
P10809_1015
36.2
P10809_1030
57.0
P10809_1049
60.0
P10809_1068
33.3
P10809_1085
47.7
P10809_1112
48.5
Naive CD8 T-cell nTPM: 49.2
Samples: 6
Max nTPM: 66.9
Min nTPM: 36.3
P10809_1016
36.3
P10809_1031
66.9
P10809_1050
54.6
P10809_1069
45.1
P10809_1087
46.1
P10809_1110
46.4
T-reg nTPM: 69.4
Samples: 6
Max nTPM: 111.0
Min nTPM: 42.9
P10809_1018
42.9
P10809_1037
75.2
P10809_1056
111.0
P10809_1075
72.7
P10809_1094
58.5
P10809_1106
55.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
178.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 157.0
Samples: 4
Max nTPM: 165.7
Min nTPM: 148.3
RHH5202_R3573
159.4
RHH5230_R3602
165.7
RHH5259_R3631
154.4
RHH5288_R3660
148.3
Effector memory CD8 T-cell nTPM: 164.4
Samples: 4
Max nTPM: 184.0
Min nTPM: 133.5
RHH5203_R3574
133.5
RHH5231_R3603
184.0
RHH5260_R3632
156.4
RHH5289_R3661
183.6
MAIT T-cell nTPM: 147.8
Samples: 4
Max nTPM: 161.8
Min nTPM: 131.2
RHH5233_R3605
153.6
RHH5205_R3576
131.2
RHH5262_R3634
161.8
RHH5297_R3663
144.7
Memory CD4 T-cell TFH nTPM: 162.3
Samples: 4
Max nTPM: 177.7
Min nTPM: 137.8
RHH5300_R3666
137.8
RHH5236_R3608
171.2
RHH5265_R3637
162.6
RHH5208_R3579
177.7
Memory CD4 T-cell Th1 nTPM: 132.8
Samples: 4
Max nTPM: 135.8
Min nTPM: 125.8
RHH5210_R3581
135.2
RHH5302_R3668
134.5
RHH5238_R3610
125.8
RHH5267_R3639
135.8
Memory CD4 T-cell Th1/Th17 nTPM: 144.0
Samples: 4
Max nTPM: 161.8
Min nTPM: 110.8
RHH5303_R3669
161.8
RHH5211_R3582
153.0
RHH5239_R3611
110.8
RHH5268_R3640
150.2
Memory CD4 T-cell Th17 nTPM: 178.6
Samples: 4
Max nTPM: 228.3
Min nTPM: 138.3
RHH5304_R3670
160.6
RHH5212_R3583
187.1
RHH5240_R3612
228.3
RHH5269_R3641
138.3
Memory CD4 T-cell Th2 nTPM: 148.1
Samples: 4
Max nTPM: 182.4
Min nTPM: 119.4
RHH5305_R3671
141.7
RHH5213_R3584
182.4
RHH5241_R3613
148.9
RHH5270_R3642
119.4
Naive CD4 T-cell nTPM: 159.1
Samples: 4
Max nTPM: 179.2
Min nTPM: 150.4
RHH5306_R3672
150.4
RHH5214_R3585
156.3
RHH5242_R3614
150.4
RHH5271_R3643
179.2
Naive CD8 T-cell nTPM: 166.1
Samples: 4
Max nTPM: 189.9
Min nTPM: 144.2
RHH5201_R3572
189.9
RHH5229_R3601
184.1
RHH5258_R3630
146.3
RHH5287_R3659
144.2
Non-Vd2 gdTCR nTPM: 145.7
Samples: 4
Max nTPM: 161.2
Min nTPM: 124.4
RHH5235_R3607
124.4
RHH5264_R3636
157.8
RHH5207_R3578
161.2
RHH5299_R3665
139.5
T-reg nTPM: 141.8
Samples: 4
Max nTPM: 174.5
Min nTPM: 121.0
RHH5301_R3667
146.5
RHH5237_R3609
121.0
RHH5266_R3638
125.0
RHH5209_R3580
174.5
Terminal effector memory CD4 T-cell nTPM: 150.9
Samples: 2
Max nTPM: 157.4
Min nTPM: 144.3
RHH5243_R3615
144.3
RHH5272_R3644
157.4
Terminal effector memory CD8 T-cell nTPM: 143.2
Samples: 4
Max nTPM: 163.2
Min nTPM: 125.5
RHH5232_R3604
149.8
RHH5204_R3575
125.5
RHH5261_R3633
134.2
RHH5296_R3662
163.2
Vd2 gdTCR nTPM: 150.9
Samples: 4
Max nTPM: 184.6
Min nTPM: 110.0
RHH5234_R3606
168.6
RHH5206_R3577
140.2
RHH5263_R3635
184.6
RHH5298_R3664
110.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
