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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3443.5
nTPM
Monaco:
370.3
nTPM
Schmiedel:
660.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3443.5
HPA sample
nTPM
gdT-cell nTPM: 1826.9
Samples: 6
Max nTPM: 2215.1
Min nTPM: 1337.4
P10809_1007
2215.1
P10809_1022
1702.5
P10809_1041
1831.0
P10809_1060
1337.4
P10809_1077
1896.1
P10809_1098
1979.0
MAIT T-cell nTPM: 2183.9
Samples: 6
Max nTPM: 2986.1
Min nTPM: 1700.1
P10809_1006
1880.7
P10809_1024
2032.4
P10809_1043
2287.6
P10809_1062
2216.2
P10809_1083
1700.1
P10809_1097
2986.1
Memory CD4 T-cell nTPM: 3087.3
Samples: 6
Max nTPM: 3546.5
Min nTPM: 2567.7
P10809_1014
3405.7
P10809_1026
3546.5
P10809_1045
2911.8
P10809_1064
2599.9
P10809_1086
2567.7
P10809_1113
3492.2
Memory CD8 T-cell nTPM: 2307.5
Samples: 5
Max nTPM: 2455.2
Min nTPM: 2121.9
P10809_1012
2359.7
P10809_1027
2302.3
P10809_1046
2455.2
P10809_1065
2121.9
P10809_1111
2298.4
Naive CD4 T-cell nTPM: 3443.5
Samples: 6
Max nTPM: 4288.5
Min nTPM: 2690.6
P10809_1015
4288.5
P10809_1030
3891.6
P10809_1049
2703.2
P10809_1068
3324.6
P10809_1085
2690.6
P10809_1112
3762.4
Naive CD8 T-cell nTPM: 3050.4
Samples: 6
Max nTPM: 4888.8
Min nTPM: 2140.4
P10809_1016
4888.8
P10809_1031
3019.7
P10809_1050
2741.3
P10809_1069
2575.8
P10809_1087
2140.4
P10809_1110
2936.1
T-reg nTPM: 2110.1
Samples: 6
Max nTPM: 2304.1
Min nTPM: 1960.1
P10809_1018
1960.1
P10809_1037
2150.1
P10809_1056
1969.8
P10809_1075
2156.3
P10809_1094
2304.1
P10809_1106
2120.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
370.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 290.6
Samples: 4
Max nTPM: 556.1
Min nTPM: 130.3
RHH5202_R3573
130.3
RHH5230_R3602
334.9
RHH5259_R3631
556.1
RHH5288_R3660
141.2
Effector memory CD8 T-cell nTPM: 150.7
Samples: 4
Max nTPM: 265.9
Min nTPM: 94.4
RHH5203_R3574
133.5
RHH5231_R3603
94.4
RHH5260_R3632
265.9
RHH5289_R3661
108.9
MAIT T-cell nTPM: 230.9
Samples: 4
Max nTPM: 309.8
Min nTPM: 135.9
RHH5233_R3605
135.9
RHH5205_R3576
275.3
RHH5262_R3634
309.8
RHH5297_R3663
202.4
Memory CD4 T-cell TFH nTPM: 146.1
Samples: 4
Max nTPM: 194.8
Min nTPM: 93.9
RHH5300_R3666
194.8
RHH5236_R3608
93.9
RHH5265_R3637
163.1
RHH5208_R3579
132.4
Memory CD4 T-cell Th1 nTPM: 370.3
Samples: 4
Max nTPM: 717.3
Min nTPM: 136.7
RHH5210_R3581
136.7
RHH5302_R3668
224.7
RHH5238_R3610
717.3
RHH5267_R3639
402.4
Memory CD4 T-cell Th1/Th17 nTPM: 282.8
Samples: 4
Max nTPM: 426.4
Min nTPM: 142.4
RHH5303_R3669
155.3
RHH5211_R3582
142.4
RHH5239_R3611
407.1
RHH5268_R3640
426.4
Memory CD4 T-cell Th17 nTPM: 284.4
Samples: 4
Max nTPM: 391.4
Min nTPM: 143.6
RHH5304_R3670
391.4
RHH5212_R3583
143.6
RHH5240_R3612
319.8
RHH5269_R3641
282.8
Memory CD4 T-cell Th2 nTPM: 294.9
Samples: 4
Max nTPM: 506.8
Min nTPM: 185.4
RHH5305_R3671
506.8
RHH5213_R3584
185.4
RHH5241_R3613
212.7
RHH5270_R3642
274.6
Naive CD4 T-cell nTPM: 349.9
Samples: 4
Max nTPM: 500.9
Min nTPM: 249.8
RHH5306_R3672
500.9
RHH5214_R3585
261.0
RHH5242_R3614
249.8
RHH5271_R3643
387.7
Naive CD8 T-cell nTPM: 351.5
Samples: 4
Max nTPM: 606.6
Min nTPM: 165.3
RHH5201_R3572
213.2
RHH5229_R3601
606.6
RHH5258_R3630
165.3
RHH5287_R3659
421.0
Non-Vd2 gdTCR nTPM: 154.5
Samples: 4
Max nTPM: 261.5
Min nTPM: 106.3
RHH5235_R3607
261.5
RHH5264_R3636
109.6
RHH5207_R3578
140.5
RHH5299_R3665
106.3
T-reg nTPM: 243.9
Samples: 4
Max nTPM: 391.5
Min nTPM: 119.5
RHH5301_R3667
199.6
RHH5237_R3609
119.5
RHH5266_R3638
391.5
RHH5209_R3580
264.9
Terminal effector memory CD4 T-cell nTPM: 230.9
Samples: 2
Max nTPM: 292.9
Min nTPM: 168.8
RHH5243_R3615
292.9
RHH5272_R3644
168.8
Terminal effector memory CD8 T-cell nTPM: 206.1
Samples: 4
Max nTPM: 379.4
Min nTPM: 64.3
RHH5232_R3604
64.3
RHH5204_R3575
199.9
RHH5261_R3633
379.4
RHH5296_R3662
180.9
Vd2 gdTCR nTPM: 309.7
Samples: 4
Max nTPM: 526.1
Min nTPM: 153.2
RHH5234_R3606
190.6
RHH5206_R3577
526.1
RHH5263_R3635
368.7
RHH5298_R3664
153.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.