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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
88.0
nTPM
Monaco:
126.9
nTPM
Schmiedel:
134.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.0
HPA sample
nTPM
gdT-cell nTPM: 68.5
Samples: 6
Max nTPM: 87.5
Min nTPM: 55.1
P10809_1007
57.3
P10809_1022
78.9
P10809_1041
87.5
P10809_1060
55.1
P10809_1077
68.1
P10809_1098
63.8
MAIT T-cell nTPM: 58.7
Samples: 6
Max nTPM: 68.7
Min nTPM: 49.9
P10809_1006
61.9
P10809_1024
61.1
P10809_1043
68.7
P10809_1062
57.5
P10809_1083
53.0
P10809_1097
49.9
Memory CD4 T-cell nTPM: 61.1
Samples: 6
Max nTPM: 70.7
Min nTPM: 53.0
P10809_1014
53.0
P10809_1026
56.5
P10809_1045
70.7
P10809_1064
66.9
P10809_1086
56.2
P10809_1113
63.2
Memory CD8 T-cell nTPM: 70.0
Samples: 5
Max nTPM: 85.4
Min nTPM: 59.9
P10809_1012
68.5
P10809_1027
70.6
P10809_1046
85.4
P10809_1065
59.9
P10809_1111
65.5
Naive CD4 T-cell nTPM: 42.6
Samples: 6
Max nTPM: 57.5
Min nTPM: 36.6
P10809_1015
38.0
P10809_1030
40.6
P10809_1049
36.6
P10809_1068
44.8
P10809_1085
57.5
P10809_1112
38.0
Naive CD8 T-cell nTPM: 59.7
Samples: 6
Max nTPM: 72.0
Min nTPM: 41.8
P10809_1016
41.8
P10809_1031
65.7
P10809_1050
59.4
P10809_1069
65.8
P10809_1087
72.0
P10809_1110
53.7
T-reg nTPM: 88.0
Samples: 6
Max nTPM: 104.2
Min nTPM: 73.7
P10809_1018
91.3
P10809_1037
83.6
P10809_1056
82.6
P10809_1075
104.2
P10809_1094
73.7
P10809_1106
92.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
126.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 58.3
Samples: 4
Max nTPM: 102.3
Min nTPM: 34.2
RHH5202_R3573
39.6
RHH5230_R3602
34.2
RHH5259_R3631
102.3
RHH5288_R3660
57.2
Effector memory CD8 T-cell nTPM: 119.9
Samples: 4
Max nTPM: 138.8
Min nTPM: 85.7
RHH5203_R3574
133.1
RHH5231_R3603
85.7
RHH5260_R3632
121.8
RHH5289_R3661
138.8
MAIT T-cell nTPM: 69.7
Samples: 4
Max nTPM: 108.7
Min nTPM: 48.5
RHH5233_R3605
61.6
RHH5205_R3576
108.7
RHH5262_R3634
48.5
RHH5297_R3663
59.9
Memory CD4 T-cell TFH nTPM: 67.1
Samples: 4
Max nTPM: 85.3
Min nTPM: 52.2
RHH5300_R3666
52.2
RHH5236_R3608
61.8
RHH5265_R3637
85.3
RHH5208_R3579
69.2
Memory CD4 T-cell Th1 nTPM: 83.6
Samples: 4
Max nTPM: 113.9
Min nTPM: 60.1
RHH5210_R3581
69.5
RHH5302_R3668
91.0
RHH5238_R3610
113.9
RHH5267_R3639
60.1
Memory CD4 T-cell Th1/Th17 nTPM: 79.5
Samples: 4
Max nTPM: 96.9
Min nTPM: 57.0
RHH5303_R3669
78.0
RHH5211_R3582
86.2
RHH5239_R3611
57.0
RHH5268_R3640
96.9
Memory CD4 T-cell Th17 nTPM: 120.5
Samples: 4
Max nTPM: 157.3
Min nTPM: 103.5
RHH5304_R3670
113.5
RHH5212_R3583
157.3
RHH5240_R3612
107.6
RHH5269_R3641
103.5
Memory CD4 T-cell Th2 nTPM: 87.7
Samples: 4
Max nTPM: 158.6
Min nTPM: 48.9
RHH5305_R3671
49.9
RHH5213_R3584
158.6
RHH5241_R3613
48.9
RHH5270_R3642
93.2
Naive CD4 T-cell nTPM: 42.8
Samples: 4
Max nTPM: 52.8
Min nTPM: 37.6
RHH5306_R3672
37.6
RHH5214_R3585
42.8
RHH5242_R3614
37.8
RHH5271_R3643
52.8
Naive CD8 T-cell nTPM: 30.6
Samples: 4
Max nTPM: 42.9
Min nTPM: 20.1
RHH5201_R3572
30.5
RHH5229_R3601
20.1
RHH5258_R3630
42.9
RHH5287_R3659
28.7
Non-Vd2 gdTCR nTPM: 104.1
Samples: 4
Max nTPM: 126.5
Min nTPM: 86.0
RHH5235_R3607
88.9
RHH5264_R3636
114.9
RHH5207_R3578
126.5
RHH5299_R3665
86.0
T-reg nTPM: 75.8
Samples: 4
Max nTPM: 99.6
Min nTPM: 61.9
RHH5301_R3667
75.8
RHH5237_R3609
66.0
RHH5266_R3638
61.9
RHH5209_R3580
99.6
Terminal effector memory CD4 T-cell nTPM: 116.0
Samples: 2
Max nTPM: 150.6
Min nTPM: 81.3
RHH5243_R3615
150.6
RHH5272_R3644
81.3
Terminal effector memory CD8 T-cell nTPM: 126.9
Samples: 4
Max nTPM: 183.0
Min nTPM: 61.0
RHH5232_R3604
114.6
RHH5204_R3575
148.8
RHH5261_R3633
183.0
RHH5296_R3662
61.0
Vd2 gdTCR nTPM: 89.1
Samples: 4
Max nTPM: 143.1
Min nTPM: 40.7
RHH5234_R3606
73.1
RHH5206_R3577
143.1
RHH5263_R3635
99.3
RHH5298_R3664
40.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
