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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
524.9
nTPM
Monaco:
80.5
nTPM
Schmiedel:
147.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
524.9
HPA sample
nTPM
gdT-cell nTPM: 384.7
Samples: 6
Max nTPM: 473.2
Min nTPM: 251.4
P10809_1007
251.4
P10809_1022
392.4
P10809_1041
473.2
P10809_1060
326.4
P10809_1077
445.3
P10809_1098
419.2
MAIT T-cell nTPM: 395.0
Samples: 6
Max nTPM: 525.0
Min nTPM: 202.1
P10809_1006
202.1
P10809_1024
387.9
P10809_1043
465.9
P10809_1062
370.3
P10809_1083
418.8
P10809_1097
525.0
Memory CD4 T-cell nTPM: 486.9
Samples: 6
Max nTPM: 605.2
Min nTPM: 295.4
P10809_1014
295.4
P10809_1026
605.2
P10809_1045
499.7
P10809_1064
442.0
P10809_1086
550.0
P10809_1113
528.8
Memory CD8 T-cell nTPM: 414.3
Samples: 5
Max nTPM: 509.6
Min nTPM: 242.8
P10809_1012
242.8
P10809_1027
488.1
P10809_1046
441.1
P10809_1065
390.0
P10809_1111
509.6
Naive CD4 T-cell nTPM: 524.9
Samples: 6
Max nTPM: 738.8
Min nTPM: 280.7
P10809_1015
280.7
P10809_1030
637.5
P10809_1049
738.8
P10809_1068
488.5
P10809_1085
486.7
P10809_1112
517.0
Naive CD8 T-cell nTPM: 457.5
Samples: 6
Max nTPM: 504.8
Min nTPM: 324.5
P10809_1016
324.5
P10809_1031
477.3
P10809_1050
485.2
P10809_1069
478.3
P10809_1087
504.8
P10809_1110
474.9
T-reg nTPM: 476.3
Samples: 6
Max nTPM: 595.2
Min nTPM: 256.9
P10809_1018
256.9
P10809_1037
493.1
P10809_1056
595.2
P10809_1075
456.6
P10809_1094
500.3
P10809_1106
555.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 50.6
Samples: 4
Max nTPM: 88.0
Min nTPM: 7.4
RHH5202_R3573
7.4
RHH5230_R3602
55.1
RHH5259_R3631
88.0
RHH5288_R3660
51.7
Effector memory CD8 T-cell nTPM: 47.1
Samples: 4
Max nTPM: 72.8
Min nTPM: 26.2
RHH5203_R3574
45.7
RHH5231_R3603
43.8
RHH5260_R3632
72.8
RHH5289_R3661
26.2
MAIT T-cell nTPM: 53.3
Samples: 4
Max nTPM: 66.0
Min nTPM: 33.0
RHH5233_R3605
33.0
RHH5205_R3576
58.4
RHH5262_R3634
66.0
RHH5297_R3663
55.7
Memory CD4 T-cell TFH nTPM: 56.0
Samples: 4
Max nTPM: 86.9
Min nTPM: 41.0
RHH5300_R3666
47.5
RHH5236_R3608
86.9
RHH5265_R3637
41.0
RHH5208_R3579
48.5
Memory CD4 T-cell Th1 nTPM: 62.2
Samples: 4
Max nTPM: 85.6
Min nTPM: 29.3
RHH5210_R3581
29.3
RHH5302_R3668
61.3
RHH5238_R3610
72.6
RHH5267_R3639
85.6
Memory CD4 T-cell Th1/Th17 nTPM: 65.9
Samples: 4
Max nTPM: 92.0
Min nTPM: 34.8
RHH5303_R3669
60.1
RHH5211_R3582
34.8
RHH5239_R3611
76.7
RHH5268_R3640
92.0
Memory CD4 T-cell Th17 nTPM: 56.7
Samples: 4
Max nTPM: 78.5
Min nTPM: 32.9
RHH5304_R3670
78.5
RHH5212_R3583
32.9
RHH5240_R3612
64.0
RHH5269_R3641
51.3
Memory CD4 T-cell Th2 nTPM: 70.5
Samples: 4
Max nTPM: 102.9
Min nTPM: 55.7
RHH5305_R3671
102.9
RHH5213_R3584
56.3
RHH5241_R3613
55.7
RHH5270_R3642
67.1
Naive CD4 T-cell nTPM: 67.8
Samples: 4
Max nTPM: 93.3
Min nTPM: 36.0
RHH5306_R3672
73.0
RHH5214_R3585
93.3
RHH5242_R3614
36.0
RHH5271_R3643
68.9
Naive CD8 T-cell nTPM: 62.8
Samples: 4
Max nTPM: 86.2
Min nTPM: 36.3
RHH5201_R3572
36.3
RHH5229_R3601
86.2
RHH5258_R3630
58.9
RHH5287_R3659
69.9
Non-Vd2 gdTCR nTPM: 58.2
Samples: 4
Max nTPM: 72.8
Min nTPM: 35.7
RHH5235_R3607
72.8
RHH5264_R3636
53.6
RHH5207_R3578
35.7
RHH5299_R3665
70.8
T-reg nTPM: 68.4
Samples: 4
Max nTPM: 76.5
Min nTPM: 59.1
RHH5301_R3667
76.5
RHH5237_R3609
59.1
RHH5266_R3638
61.8
RHH5209_R3580
76.0
Terminal effector memory CD4 T-cell nTPM: 56.0
Samples: 2
Max nTPM: 63.8
Min nTPM: 48.2
RHH5243_R3615
63.8
RHH5272_R3644
48.2
Terminal effector memory CD8 T-cell nTPM: 80.5
Samples: 4
Max nTPM: 125.4
Min nTPM: 45.4
RHH5232_R3604
47.3
RHH5204_R3575
103.8
RHH5261_R3633
125.4
RHH5296_R3662
45.4
Vd2 gdTCR nTPM: 75.2
Samples: 4
Max nTPM: 103.0
Min nTPM: 54.1
RHH5234_R3606
54.1
RHH5206_R3577
103.0
RHH5263_R3635
67.1
RHH5298_R3664
76.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
