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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
70.3
nTPM
Monaco:
24.5
nTPM
Schmiedel:
56.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.3
HPA sample
nTPM
gdT-cell nTPM: 49.8
Samples: 6
Max nTPM: 69.6
Min nTPM: 37.2
P10809_1007
37.2
P10809_1022
50.9
P10809_1041
69.6
P10809_1060
42.8
P10809_1077
47.0
P10809_1098
51.2
MAIT T-cell nTPM: 56.4
Samples: 6
Max nTPM: 70.1
Min nTPM: 33.9
P10809_1006
33.9
P10809_1024
52.7
P10809_1043
63.3
P10809_1062
58.7
P10809_1083
59.9
P10809_1097
70.1
Memory CD4 T-cell nTPM: 62.5
Samples: 6
Max nTPM: 77.9
Min nTPM: 42.0
P10809_1014
42.0
P10809_1026
77.9
P10809_1045
67.2
P10809_1064
64.7
P10809_1086
56.5
P10809_1113
66.7
Memory CD8 T-cell nTPM: 53.1
Samples: 5
Max nTPM: 61.0
Min nTPM: 39.6
P10809_1012
39.6
P10809_1027
53.1
P10809_1046
61.0
P10809_1065
51.8
P10809_1111
60.2
Naive CD4 T-cell nTPM: 69.7
Samples: 6
Max nTPM: 102.3
Min nTPM: 45.2
P10809_1015
45.2
P10809_1030
67.7
P10809_1049
102.3
P10809_1068
64.7
P10809_1085
64.3
P10809_1112
73.9
Naive CD8 T-cell nTPM: 55.6
Samples: 6
Max nTPM: 61.3
Min nTPM: 46.1
P10809_1016
46.1
P10809_1031
59.5
P10809_1050
58.9
P10809_1069
59.8
P10809_1087
48.1
P10809_1110
61.3
T-reg nTPM: 70.3
Samples: 6
Max nTPM: 97.3
Min nTPM: 40.6
P10809_1018
40.6
P10809_1037
70.8
P10809_1056
97.3
P10809_1075
78.2
P10809_1094
66.3
P10809_1106
68.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 19.0
Samples: 4
Max nTPM: 21.5
Min nTPM: 15.1
RHH5202_R3573
21.5
RHH5230_R3602
18.1
RHH5259_R3631
15.1
RHH5288_R3660
21.3
Effector memory CD8 T-cell nTPM: 16.1
Samples: 4
Max nTPM: 23.5
Min nTPM: 10.6
RHH5203_R3574
16.9
RHH5231_R3603
13.5
RHH5260_R3632
23.5
RHH5289_R3661
10.6
MAIT T-cell nTPM: 20.3
Samples: 4
Max nTPM: 22.1
Min nTPM: 17.9
RHH5233_R3605
20.8
RHH5205_R3576
20.5
RHH5262_R3634
22.1
RHH5297_R3663
17.9
Memory CD4 T-cell TFH nTPM: 20.6
Samples: 4
Max nTPM: 31.2
Min nTPM: 15.8
RHH5300_R3666
16.2
RHH5236_R3608
31.2
RHH5265_R3637
19.2
RHH5208_R3579
15.8
Memory CD4 T-cell Th1 nTPM: 21.1
Samples: 4
Max nTPM: 25.9
Min nTPM: 19.0
RHH5210_R3581
19.8
RHH5302_R3668
25.9
RHH5238_R3610
19.5
RHH5267_R3639
19.0
Memory CD4 T-cell Th1/Th17 nTPM: 23.8
Samples: 4
Max nTPM: 27.3
Min nTPM: 20.4
RHH5303_R3669
27.3
RHH5211_R3582
23.9
RHH5239_R3611
20.4
RHH5268_R3640
23.6
Memory CD4 T-cell Th17 nTPM: 19.2
Samples: 4
Max nTPM: 24.7
Min nTPM: 13.6
RHH5304_R3670
24.7
RHH5212_R3583
13.6
RHH5240_R3612
23.2
RHH5269_R3641
15.1
Memory CD4 T-cell Th2 nTPM: 19.3
Samples: 4
Max nTPM: 28.6
Min nTPM: 13.5
RHH5305_R3671
21.0
RHH5213_R3584
13.9
RHH5241_R3613
28.6
RHH5270_R3642
13.5
Naive CD4 T-cell nTPM: 23.1
Samples: 4
Max nTPM: 29.0
Min nTPM: 14.0
RHH5306_R3672
28.7
RHH5214_R3585
29.0
RHH5242_R3614
14.0
RHH5271_R3643
20.8
Naive CD8 T-cell nTPM: 23.4
Samples: 4
Max nTPM: 27.5
Min nTPM: 20.3
RHH5201_R3572
22.6
RHH5229_R3601
23.3
RHH5258_R3630
27.5
RHH5287_R3659
20.3
Non-Vd2 gdTCR nTPM: 15.8
Samples: 4
Max nTPM: 21.1
Min nTPM: 10.9
RHH5235_R3607
10.9
RHH5264_R3636
21.1
RHH5207_R3578
15.8
RHH5299_R3665
15.3
T-reg nTPM: 20.9
Samples: 4
Max nTPM: 24.0
Min nTPM: 18.1
RHH5301_R3667
18.1
RHH5237_R3609
24.0
RHH5266_R3638
21.7
RHH5209_R3580
19.8
Terminal effector memory CD4 T-cell nTPM: 20.5
Samples: 2
Max nTPM: 21.1
Min nTPM: 19.8
RHH5243_R3615
19.8
RHH5272_R3644
21.1
Terminal effector memory CD8 T-cell nTPM: 19.0
Samples: 4
Max nTPM: 25.3
Min nTPM: 14.3
RHH5232_R3604
18.9
RHH5204_R3575
25.3
RHH5261_R3633
14.3
RHH5296_R3662
17.3
Vd2 gdTCR nTPM: 24.5
Samples: 4
Max nTPM: 28.9
Min nTPM: 20.0
RHH5234_R3606
20.0
RHH5206_R3577
28.9
RHH5263_R3635
27.4
RHH5298_R3664
21.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
