We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
111.8
nTPM
Monaco:
46.6
nTPM
Schmiedel:
26.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
111.8
HPA sample
nTPM
gdT-cell nTPM: 88.8
Samples: 6
Max nTPM: 121.7
Min nTPM: 57.1
P10809_1007
57.1
P10809_1022
101.8
P10809_1041
121.7
P10809_1060
81.6
P10809_1077
86.8
P10809_1098
83.7
MAIT T-cell nTPM: 74.5
Samples: 6
Max nTPM: 85.3
Min nTPM: 43.1
P10809_1006
43.1
P10809_1024
81.9
P10809_1043
85.3
P10809_1062
73.9
P10809_1083
84.7
P10809_1097
78.2
Memory CD4 T-cell nTPM: 87.0
Samples: 6
Max nTPM: 97.5
Min nTPM: 60.2
P10809_1014
60.2
P10809_1026
93.2
P10809_1045
97.5
P10809_1064
94.5
P10809_1086
90.9
P10809_1113
85.6
Memory CD8 T-cell nTPM: 88.6
Samples: 5
Max nTPM: 111.5
Min nTPM: 62.3
P10809_1012
62.3
P10809_1027
85.8
P10809_1046
109.5
P10809_1065
111.5
P10809_1111
73.8
Naive CD4 T-cell nTPM: 75.7
Samples: 6
Max nTPM: 103.8
Min nTPM: 47.9
P10809_1015
47.9
P10809_1030
103.8
P10809_1049
94.2
P10809_1068
57.0
P10809_1085
80.4
P10809_1112
70.7
Naive CD8 T-cell nTPM: 88.3
Samples: 6
Max nTPM: 105.8
Min nTPM: 57.8
P10809_1016
57.8
P10809_1031
93.5
P10809_1050
91.8
P10809_1069
105.8
P10809_1087
97.5
P10809_1110
83.3
T-reg nTPM: 111.8
Samples: 6
Max nTPM: 134.4
Min nTPM: 79.7
P10809_1018
79.7
P10809_1037
117.3
P10809_1056
119.1
P10809_1075
134.4
P10809_1094
122.6
P10809_1106
97.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.6
Samples: 4
Max nTPM: 49.7
Min nTPM: 24.1
RHH5202_R3573
49.7
RHH5230_R3602
34.9
RHH5259_R3631
29.7
RHH5288_R3660
24.1
Effector memory CD8 T-cell nTPM: 36.1
Samples: 4
Max nTPM: 45.0
Min nTPM: 31.1
RHH5203_R3574
45.0
RHH5231_R3603
31.1
RHH5260_R3632
33.4
RHH5289_R3661
34.9
MAIT T-cell nTPM: 28.9
Samples: 4
Max nTPM: 40.0
Min nTPM: 17.2
RHH5233_R3605
40.0
RHH5205_R3576
27.7
RHH5262_R3634
17.2
RHH5297_R3663
30.6
Memory CD4 T-cell TFH nTPM: 46.6
Samples: 4
Max nTPM: 77.7
Min nTPM: 29.8
RHH5300_R3666
37.9
RHH5236_R3608
77.7
RHH5265_R3637
41.1
RHH5208_R3579
29.8
Memory CD4 T-cell Th1 nTPM: 38.6
Samples: 4
Max nTPM: 47.2
Min nTPM: 31.7
RHH5210_R3581
42.0
RHH5302_R3668
47.2
RHH5238_R3610
33.4
RHH5267_R3639
31.7
Memory CD4 T-cell Th1/Th17 nTPM: 37.0
Samples: 4
Max nTPM: 45.1
Min nTPM: 29.7
RHH5303_R3669
41.9
RHH5211_R3582
45.1
RHH5239_R3611
31.3
RHH5268_R3640
29.7
Memory CD4 T-cell Th17 nTPM: 31.9
Samples: 4
Max nTPM: 42.7
Min nTPM: 17.1
RHH5304_R3670
42.7
RHH5212_R3583
37.6
RHH5240_R3612
17.1
RHH5269_R3641
30.1
Memory CD4 T-cell Th2 nTPM: 34.1
Samples: 4
Max nTPM: 38.4
Min nTPM: 31.8
RHH5305_R3671
32.3
RHH5213_R3584
38.4
RHH5241_R3613
33.9
RHH5270_R3642
31.8
Naive CD4 T-cell nTPM: 40.8
Samples: 4
Max nTPM: 50.8
Min nTPM: 31.5
RHH5306_R3672
31.5
RHH5214_R3585
50.8
RHH5242_R3614
42.7
RHH5271_R3643
38.3
Naive CD8 T-cell nTPM: 36.7
Samples: 4
Max nTPM: 52.6
Min nTPM: 18.8
RHH5201_R3572
32.9
RHH5229_R3601
18.8
RHH5258_R3630
52.6
RHH5287_R3659
42.5
Non-Vd2 gdTCR nTPM: 35.3
Samples: 4
Max nTPM: 39.7
Min nTPM: 30.4
RHH5235_R3607
38.2
RHH5264_R3636
39.7
RHH5207_R3578
30.4
RHH5299_R3665
32.9
T-reg nTPM: 36.1
Samples: 4
Max nTPM: 62.6
Min nTPM: 22.5
RHH5301_R3667
32.8
RHH5237_R3609
62.6
RHH5266_R3638
22.5
RHH5209_R3580
26.6
Terminal effector memory CD4 T-cell nTPM: 32.9
Samples: 2
Max nTPM: 51.6
Min nTPM: 14.1
RHH5243_R3615
14.1
RHH5272_R3644
51.6
Terminal effector memory CD8 T-cell nTPM: 38.7
Samples: 4
Max nTPM: 43.5
Min nTPM: 32.0
RHH5232_R3604
39.3
RHH5204_R3575
43.5
RHH5261_R3633
40.0
RHH5296_R3662
32.0
Vd2 gdTCR nTPM: 42.7
Samples: 4
Max nTPM: 59.9
Min nTPM: 27.3
RHH5234_R3606
27.3
RHH5206_R3577
35.0
RHH5263_R3635
48.6
RHH5298_R3664
59.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
