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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
144.2
nTPM
FANTOM5:
0.0
Scaled Tags Per Million
Pig:
0.2
nTPM
Allen mouse:
0.0
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
144.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 137.4
2301
Female, age 85, both hemispheres
175.2
1984
Male, age 76, both hemispheres
127.8
2188
Female, age 91, both hemispheres
123.6
2090
Male, age 80, both hemispheres
123.1
Dorsal cochlear nucleus nTPM: 121.9
2058
Male, age 76, both hemispheres
143.0
2378
Male, age 80, both hemispheres
123.6
2187
Female, age 91, both hemispheres
120.6
2370
Male, age 61, both hemispheres
117.8
2802
Male, age 74, right hemisphere
104.4
Dorsal tegmental nucleus nTPM: 114.8
1936
Male, age 76, left hemisphere
126.9
2326
Male, age 74, both hemispheres
124.2
2358
Male, age 61, both hemispheres
108.0
2083
Male, age 80, both hemispheres
100.0
Dorsolateral tegmental area nTPM: 116.4
2360
Male, age 74, both hemispheres
130.6
2141
Male, age 76, both hemispheres
129.5
2337
Male, age 61, both hemispheres
116.8
2751
Female, age 85, both hemispheres
104.2
2654
Male, age 80, both hemispheres
101.2
Kolliker-Fuse nucleus nTPM: 114.5
2793
Female, age 91, left hemisphere
136.4
2315
Male, age 76, right hemisphere
113.2
2163
Male, age 80, both hemispheres
93.8
Lateral lemniscal nuclei nTPM: 135.2
2320
Female, age 91, left hemisphere
158.8
2036
Male, age 80, both hemispheres
140.5
2169
Male, age 76, both hemispheres
129.5
2453
Male, age 74, right hemisphere
125.3
2746
Female, age 85, left hemisphere
121.9
Lateral parabrachial nucleus nTPM: 132.2
2790
Male, age 61, both hemispheres
149.2
2792
Male, age 76, both hemispheres
140.8
2013
Male, age 80, both hemispheres
126.2
2139
Female, age 85, right hemisphere
112.6
Lateral vestibular nucleus nTPM: 115.7
2311
Male, age 80, both hemispheres
123.6
2184
Male, age 76, both hemispheres
107.8
Locus coeruleus nTPM: 111.3
2788
Male, age 74, unknown
127.9
2162
Male, age 80, both hemispheres
119.3
2014
Male, age 55, unknown
115.8
2317
Female, age 72, unknown
113.0
2720
Male, age 74, both hemispheres
110.0
1980
Male, age 76, both hemispheres
101.4
2123
Female, age 91, both hemispheres
92.0
Medial parabrachial nucleus nTPM: 111.7
2786
Male, age 76, both hemispheres
123.8
2156
Male, age 61, both hemispheres
122.3
2854
Male, age 80, both hemispheres
114.1
2170
Female, age 91, both hemispheres
99.4
2463
Female, age 85, right hemisphere
98.7
Medial periolivary nuclei nTPM: 133.6
2458
Female, age 91, both hemispheres
149.9
2791
Male, age 74, right hemisphere
140.0
2081
Male, age 80, both hemispheres
136.3
2171
Female, age 85, both hemispheres
127.0
2063
Male, age 76, both hemispheres
114.8
Motor facial nucleus nTPM: 134.8
2327
Male, age 80, both hemispheres
177.9
2697
Female, age 85, both hemispheres
144.3
2126
Male, age 61, both hemispheres
127.7
2365
Male, age 74, right hemisphere
124.7
2795
Female, age 91, both hemispheres
121.5
2062
Male, age 76, both hemispheres
112.7
Motor trigeminal nucleus nTPM: 133.8
2321
Female, age 91, both hemispheres
163.7
2079
Male, age 80, both hemispheres
132.4
2309
Male, age 76, both hemispheres
131.7
2560
Male, age 74, both hemispheres
120.6
2335
Male, age 61, both hemispheres
120.4
Nuclei of the trapezoid body nTPM: 130.9
2368
Female, age 91, both hemispheres
148.9
2159
Male, age 61, both hemispheres
135.4
2735
Female, age 85, both hemispheres
134.0
2166
Male, age 80, both hemispheres
127.8
1983
Male, age 76, both hemispheres
108.2
Nucleus raphe magnus nTPM: 130.2
2328
Male, age 80, both hemispheres
147.0
2172
Female, age 85, both hemispheres
136.6
2459
Female, age 91, both hemispheres
132.6
2455
Male, age 74, both hemispheres
123.9
2051
Male, age 76, both hemispheres
122.4
2160
Male, age 61, both hemispheres
118.5
Paramedian reticular nucleus nTPM: 121.8
2052
Male, age 76, both hemispheres
139.9
2313
Male, age 61, both hemispheres
129.1
2050
Female, age 85, both hemispheres
114.3
2057
Male, age 80, both hemispheres
103.9
Pedunculopontine tegmental nucleus nTPM: 125.2
2338
Male, age 61, both hemispheres
139.9
2334
Male, age 80, both hemispheres
118.8
1921
Female, age 85, both hemispheres
117.0
Pontine nuclei nTPM: 118.3
2319
Female, age 91, both hemispheres
141.7
2115
Male, age 80, left hemisphere
136.2
2454
Male, age 74, left hemisphere
134.3
2727
Male, age 61, right hemisphere
121.3
2109
Female, age 72, unknown
117.9
1863
Male, age 55, unknown
105.5
1968
Male, age 76, left hemisphere
101.4
2787
Female, age 85, both hemispheres
88.1
Pontine raphe nucleus nTPM: 118.2
2853
Male, age 76, midline
122.8
2122
Female, age 85, midline
113.5
Posteroventral cochlear nucleus nTPM: 121.7
2135
Female, age 91, both hemispheres
143.8
2070
Male, age 76, both hemispheres
121.5
2371
Male, age 61, both hemispheres
115.7
2341
Male, age 80, both hemispheres
114.8
2752
Female, age 85, both hemispheres
112.5
Principal sensory trigeminal nucleus nTPM: 134.6
2008
Male, age 80, left hemisphere
144.4
2367
Female, age 91, left hemisphere
143.2
2324
Male, age 76, both hemispheres
132.6
2158
Male, age 61, both hemispheres
118.4
Reticular pontine nucleus, caudal nTPM: 136.6
2332
Male, age 80, right hemisphere
154.0
2559
Male, age 74, both hemispheres
136.2
2457
Female, age 91, both hemispheres
131.9
2092
Male, age 76, both hemispheres
124.3
Reticular pontine nucleus, oral nTPM: 123.1
2366
Female, age 91, both hemispheres
147.1
2361
Male, age 74, both hemispheres
130.1
2012
Female, age 85, both hemispheres
123.1
1939
Male, age 80, both hemispheres
109.5
2167
Male, age 76, both hemispheres
105.5
Reticulotegmental nucleus nTPM: 127.3
2325
Male, age 76, both hemispheres
137.0
2322
Female, age 91, both hemispheres
132.6
2333
Male, age 80, both hemispheres
130.3
2452
Male, age 74, both hemispheres
109.1
Spinal trigeminal nucleus, oral nTPM: 113.3
1978
Male, age 76, both hemispheres
124.7
2737
Female, age 85, both hemispheres
109.8
2164
Male, age 80, both hemispheres
105.5
Subcoeruleus area nTPM: 121.9
2089
Male, age 76, left hemisphere
141.9
1958
Male, age 80, both hemispheres
130.4
2323
Female, age 91, left hemisphere
125.8
2451
Male, age 74, both hemispheres
105.7
2369
Female, age 85, left hemisphere
105.5
Superior olive nTPM: 140.6
2329
Male, age 80, right hemisphere
155.3
2561
Female, age 91, both hemispheres
154.4
2364
Male, age 74, right hemisphere
136.3
1875
Female, age 85, both hemispheres
128.9
2020
Male, age 76, both hemispheres
128.0
Ventral periolivary nuclei nTPM: 144.2
2794
Female, age 91, left hemisphere
174.6
2130
Female, age 85, both hemispheres
138.3
2023
Male, age 76, both hemispheres
137.4
2165
Male, age 80, both hemispheres
126.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 120.8
1959
Male, age 76, both hemispheres
125.7
2161
Male, age 80, both hemispheres
124.8
2456
Female, age 91, both hemispheres
122.1
2359
Male, age 61, both hemispheres
120.4
2449
Male, age 74, both hemispheres
120.3
2840
Female, age 85, both hemispheres
111.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
0.2
Pig sample
Sample description
nTPM
Pons nTPM: 0.2
Samples: 4
Max nTPM: 0.4
Min nTPM: 0.1
Sample A
Female
0.4
Sample B
Female
0.2
Sample C
Male
0.1
Sample D
Male
0.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
