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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
459.1
nTPM
Monaco:
153.1
nTPM
Schmiedel:
51.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
459.1
HPA sample
nTPM
gdT-cell nTPM: 223.5
Samples: 6
Max nTPM: 310.6
Min nTPM: 180.2
P10809_1007
196.3
P10809_1022
261.7
P10809_1041
310.6
P10809_1060
180.2
P10809_1077
191.8
P10809_1098
200.5
MAIT T-cell nTPM: 314.3
Samples: 6
Max nTPM: 382.2
Min nTPM: 204.2
P10809_1006
204.2
P10809_1024
382.2
P10809_1043
343.9
P10809_1062
306.8
P10809_1083
293.4
P10809_1097
355.3
Memory CD4 T-cell nTPM: 205.7
Samples: 6
Max nTPM: 231.5
Min nTPM: 165.7
P10809_1014
165.7
P10809_1026
209.7
P10809_1045
211.1
P10809_1064
225.4
P10809_1086
231.5
P10809_1113
190.5
Memory CD8 T-cell nTPM: 166.7
Samples: 5
Max nTPM: 191.1
Min nTPM: 131.4
P10809_1012
131.4
P10809_1027
163.6
P10809_1046
183.4
P10809_1065
191.1
P10809_1111
164.0
Naive CD4 T-cell nTPM: 202.0
Samples: 6
Max nTPM: 247.7
Min nTPM: 144.9
P10809_1015
144.9
P10809_1030
187.9
P10809_1049
242.2
P10809_1068
202.3
P10809_1085
247.7
P10809_1112
187.2
Naive CD8 T-cell nTPM: 186.7
Samples: 6
Max nTPM: 231.3
Min nTPM: 135.1
P10809_1016
135.1
P10809_1031
215.5
P10809_1050
167.8
P10809_1069
179.1
P10809_1087
231.3
P10809_1110
191.4
T-reg nTPM: 459.1
Samples: 6
Max nTPM: 548.3
Min nTPM: 311.1
P10809_1018
311.1
P10809_1037
548.3
P10809_1056
460.0
P10809_1075
512.4
P10809_1094
482.3
P10809_1106
440.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
153.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 54.8
Samples: 4
Max nTPM: 83.7
Min nTPM: 41.2
RHH5202_R3573
41.2
RHH5230_R3602
44.5
RHH5259_R3631
49.9
RHH5288_R3660
83.7
Effector memory CD8 T-cell nTPM: 59.4
Samples: 4
Max nTPM: 80.3
Min nTPM: 42.9
RHH5203_R3574
80.3
RHH5231_R3603
69.5
RHH5260_R3632
42.9
RHH5289_R3661
44.8
MAIT T-cell nTPM: 146.6
Samples: 4
Max nTPM: 185.8
Min nTPM: 126.4
RHH5233_R3605
129.2
RHH5205_R3576
126.4
RHH5262_R3634
144.9
RHH5297_R3663
185.8
Memory CD4 T-cell TFH nTPM: 87.6
Samples: 4
Max nTPM: 117.9
Min nTPM: 67.4
RHH5300_R3666
78.9
RHH5236_R3608
117.9
RHH5265_R3637
67.4
RHH5208_R3579
86.1
Memory CD4 T-cell Th1 nTPM: 91.9
Samples: 4
Max nTPM: 135.7
Min nTPM: 65.9
RHH5210_R3581
77.5
RHH5302_R3668
135.7
RHH5238_R3610
65.9
RHH5267_R3639
88.4
Memory CD4 T-cell Th1/Th17 nTPM: 89.3
Samples: 4
Max nTPM: 116.7
Min nTPM: 46.6
RHH5303_R3669
116.7
RHH5211_R3582
113.4
RHH5239_R3611
46.6
RHH5268_R3640
80.3
Memory CD4 T-cell Th17 nTPM: 87.3
Samples: 4
Max nTPM: 127.4
Min nTPM: 57.7
RHH5304_R3670
87.3
RHH5212_R3583
127.4
RHH5240_R3612
76.8
RHH5269_R3641
57.7
Memory CD4 T-cell Th2 nTPM: 57.3
Samples: 4
Max nTPM: 63.4
Min nTPM: 47.6
RHH5305_R3671
63.4
RHH5213_R3584
47.6
RHH5241_R3613
59.8
RHH5270_R3642
58.2
Naive CD4 T-cell nTPM: 89.1
Samples: 4
Max nTPM: 123.1
Min nTPM: 52.2
RHH5306_R3672
78.8
RHH5214_R3585
123.1
RHH5242_R3614
52.2
RHH5271_R3643
102.4
Naive CD8 T-cell nTPM: 72.1
Samples: 4
Max nTPM: 112.5
Min nTPM: 54.6
RHH5201_R3572
56.4
RHH5229_R3601
54.6
RHH5258_R3630
112.5
RHH5287_R3659
64.7
Non-Vd2 gdTCR nTPM: 47.5
Samples: 4
Max nTPM: 66.4
Min nTPM: 21.3
RHH5235_R3607
21.3
RHH5264_R3636
48.8
RHH5207_R3578
66.4
RHH5299_R3665
53.5
T-reg nTPM: 137.7
Samples: 4
Max nTPM: 175.7
Min nTPM: 101.9
RHH5301_R3667
175.7
RHH5237_R3609
151.2
RHH5266_R3638
101.9
RHH5209_R3580
121.8
Terminal effector memory CD4 T-cell nTPM: 88.1
Samples: 2
Max nTPM: 130.0
Min nTPM: 46.2
RHH5243_R3615
46.2
RHH5272_R3644
130.0
Terminal effector memory CD8 T-cell nTPM: 80.4
Samples: 4
Max nTPM: 133.9
Min nTPM: 53.6
RHH5232_R3604
53.6
RHH5204_R3575
133.9
RHH5261_R3633
61.6
RHH5296_R3662
72.6
Vd2 gdTCR nTPM: 153.1
Samples: 4
Max nTPM: 282.1
Min nTPM: 79.0
RHH5234_R3606
79.0
RHH5206_R3577
282.1
RHH5263_R3635
111.8
RHH5298_R3664
139.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
