HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:8.4 nTPM
HPA Brain:19.3 nTPM
GTEx:8.4 nTPM
FANTOM5:7.5 Scaled Tags Per Million
Pig:32.4 nTPM
Mouse:16.4 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011006Antibody HPA074255
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.3
Sample id Sample description nTPM
Hippocampus
nTPM: 14.5
1898 Male, age 80, left hemisphere 24.1
1855 Male, age 76, left hemisphere 14.7
2621 Female, age 67, right hemisphere 14.6
1911 Female, age 85, right hemisphere 11.7
2529 Female, age 94, left hemisphere 11.5
2148 Female, age 91, left hemisphere 10.4
Dentate gyrus
nTPM: 13.3
2530 Female, age 94, left hemisphere 16.5
1927 Female, age 91, both hemispheres 16.0
2010 Male, age 76, both hemispheres 13.4
2528 Male, age 74, both hemispheres 13.4
2246 Female, age 85, both hemispheres 10.9
2531 Female, age 67, both hemispheres 9.8
Entorhinal gyrus
nTPM: 16.0
2613 Female, age 94, left hemisphere 21.4
2764 Male, age 80, right hemisphere 19.2
1787 Male, age 76, left hemisphere 16.1
2686 Male, age 75, right hemisphere 15.5
1938 Female, age 85, left hemisphere 13.5
2117 Female, age 91, right hemisphere 10.7
Hippocampus, CA1
nTPM: 18.2
2749 Male, age 80, left hemisphere 38.2
2527 Male, age 74, both hemispheres 16.0
1873 Female, age 85, both hemispheres 13.5
2082 Female, age 91, right hemisphere 13.1
2045 Male, age 76, both hemispheres 10.0
Hippocampus, CA2
nTPM: 16.7
1892 Male, age 76, both hemispheres 21.5
2437 Female, age 94, left hemisphere 20.1
1963 Male, age 80, left hemisphere 15.8
2249 Male, age 74, both hemispheres 15.5
1940 Female, age 85, left hemisphere 14.8
2113 Female, age 91, right hemisphere 12.7
Hippocampus, CA3
nTPM: 18.5
2137 Male, age 80, left hemisphere 38.7
1867 Male, age 76, both hemispheres 22.5
2861 Female, age 67, both hemispheres 15.9
2436 Male, age 74, both hemispheres 12.1
1891 Female, age 85, both hemispheres 11.1
2620 Female, age 94, left hemisphere 10.8
Parahippocampal cortex
nTPM: 17.1
2622 Female, age 67, right hemisphere 20.3
2245 Female, age 91, both hemispheres 19.1
1850 Male, age 80, both hemispheres 18.9
2532 Female, age 72, left hemisphere 17.9
2018 Male, age 76, both hemispheres 17.1
1933 Female, age 85, both hemispheres 16.9
1990 Female, age 91, right hemisphere 16.9
2250 Female, age 67, right hemisphere 16.7
2693 Female, age 94, both hemispheres 16.4
2692 Male, age 74, both hemispheres 11.3
Perirhinal gyrus
nTPM: 19.3
1847 Female, age 91, left hemisphere 22.3
1794 Male, age 80, right hemisphere 22.1
2521 Female, age 94, right hemisphere 20.7
1841 Female, age 85, right hemisphere 15.7
2848 Male, age 76, right hemisphere 15.7
Subiculum
nTPM: 14.8
1901 Male, age 80, both hemispheres 23.7
1977 Female, age 85, both hemispheres 16.2
2619 Male, age 74, both hemispheres 14.4
2042 Male, age 76, both hemispheres 13.4
2438 Female, age 94, left hemisphere 11.4
2729 Female, age 91, right hemisphere 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.4
Samples: 197

Max nTPM: 24.4
Min nTPM: 0.6
Std nTPM: 4.9
Median nTPM: 7.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 24.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 22.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 20.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 20.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 19.8
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 19.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 19.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 18.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 18.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 18.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.5
FF:10169-103B7 60 years, female 9.3
FF:10153-102I9 76 years, female 5.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.4
Pig sample Sample description nTPM
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 20.5
Min nTPM: 13.6
Sample A Female 20.5
Sample B Female 13.6
Sample C Male 15.7
Sample D Male 15.1
Dorsal hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 25.6
Min nTPM: 12.8
Sample A Female 25.6
Sample B Female 20.3
Sample C Male 23.8
Sample D Male 12.8
Entorhinal cortex
nTPM: 32.3
Samples: 4

Max nTPM: 40.8
Min nTPM: 27.7
Sample A Female 28.5
Sample B Female 40.8
Sample C Male 27.7
Sample D Male 32.3
Ventral hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 26.9
Min nTPM: 11.3
Sample A Female 23.8
Sample B Female 11.3
Sample C Male 26.9
Sample D Male 24.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 13.9
Min nTPM: 9.9
Sample A Male 13.9
Sample B Male 13.2
Sample C Female 12.2
Sample D Female 9.9
Hippocampal formation
nTPM: 16.5
Samples: 4

Max nTPM: 20.2
Min nTPM: 12.6
Sample A Male 12.6
Sample B Male 17.7
Sample C Female 20.2
Sample D Female 15.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
79544874 Antisense, RP_071101_01_B04, Mouse strain C57BL/6J (56 days, male) 2.1
79556632 Antisense, RP_071101_01_B04, Mouse strain C57BL/6J (56 days, male) 1.8
1291 Antisense, RP_Baylor_103350, Mouse strain C57BL/6J (56 days, male) 0.8
1292 Antisense, RP_Baylor_103350, Mouse strain C57BL/6J (56 days, male) 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org