HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:6.9 nTPM
HPA Brain:15.9 nTPM
GTEx:6.9 nTPM
FANTOM5:26.7 Scaled Tags Per Million
Pig:7.7 nTPM
Mouse:2.7 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.9
Sample id Sample description nTPM
Hippocampus
nTPM: 15.5
2529 Female, age 94, left hemisphere 19.9
1855 Male, age 76, left hemisphere 15.9
2621 Female, age 67, right hemisphere 15.5
2148 Female, age 91, left hemisphere 14.6
1898 Male, age 80, left hemisphere 13.7
1911 Female, age 85, right hemisphere 13.3
Dentate gyrus
nTPM: 15.9
2530 Female, age 94, left hemisphere 21.9
2531 Female, age 67, both hemispheres 18.3
2528 Male, age 74, both hemispheres 16.6
2010 Male, age 76, both hemispheres 13.2
1927 Female, age 91, both hemispheres 12.7
2246 Female, age 85, both hemispheres 12.7
Entorhinal gyrus
nTPM: 13.9
2686 Male, age 75, right hemisphere 18.3
1787 Male, age 76, left hemisphere 15.1
2764 Male, age 80, right hemisphere 13.6
2117 Female, age 91, right hemisphere 13.5
1938 Female, age 85, left hemisphere 11.7
2613 Female, age 94, left hemisphere 11.4
Hippocampus, CA1
nTPM: 12.9
2527 Male, age 74, both hemispheres 16.4
2082 Female, age 91, right hemisphere 13.3
2045 Male, age 76, both hemispheres 12.1
1873 Female, age 85, both hemispheres 11.6
2749 Male, age 80, left hemisphere 11.0
Hippocampus, CA2
nTPM: 14.7
2249 Male, age 74, both hemispheres 17.4
2437 Female, age 94, left hemisphere 16.9
1963 Male, age 80, left hemisphere 16.5
2113 Female, age 91, right hemisphere 13.7
1940 Female, age 85, left hemisphere 13.4
1892 Male, age 76, both hemispheres 10.6
Hippocampus, CA3
nTPM: 15.9
2861 Female, age 67, both hemispheres 23.0
2620 Female, age 94, left hemisphere 16.2
1867 Male, age 76, both hemispheres 15.2
2436 Male, age 74, both hemispheres 14.4
2137 Male, age 80, left hemisphere 13.4
1891 Female, age 85, both hemispheres 13.1
Parahippocampal cortex
nTPM: 14.3
2622 Female, age 67, right hemisphere 16.5
2018 Male, age 76, both hemispheres 16.0
1933 Female, age 85, both hemispheres 15.6
2692 Male, age 74, both hemispheres 15.5
1990 Female, age 91, right hemisphere 14.7
2532 Female, age 72, left hemisphere 14.0
2245 Female, age 91, both hemispheres 13.9
2250 Female, age 67, right hemisphere 12.9
1850 Male, age 80, both hemispheres 11.7
2693 Female, age 94, both hemispheres 11.7
Perirhinal gyrus
nTPM: 12.4
2848 Male, age 76, right hemisphere 13.5
1847 Female, age 91, left hemisphere 13.2
1794 Male, age 80, right hemisphere 12.5
1841 Female, age 85, right hemisphere 12.4
2521 Female, age 94, right hemisphere 10.5
Subiculum
nTPM: 14.4
2619 Male, age 74, both hemispheres 16.2
1977 Female, age 85, both hemispheres 15.0
2729 Female, age 91, right hemisphere 14.7
2042 Male, age 76, both hemispheres 14.6
1901 Male, age 80, both hemispheres 12.9
2438 Female, age 94, left hemisphere 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.9
Samples: 197

Max nTPM: 28.9
Min nTPM: 0.9
Std nTPM: 4.0
Median nTPM: 6.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 28.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 24.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 23.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 21.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 19.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 16.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 16.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 15.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 15.0
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 14.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.7
FF:10153-102I9 76 years, female 32.7
FF:10169-103B7 60 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.7
Pig sample Sample description nTPM
Subiculum
nTPM: 6.3
Samples: 4

Max nTPM: 7.7
Min nTPM: 5.1
Sample A Female 5.3
Sample B Female 5.1
Sample C Male 7.1
Sample D Male 7.7
Dorsal hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 7.2
Min nTPM: 4.1
Sample A Female 4.1
Sample B Female 5.3
Sample C Male 7.2
Sample D Male 6.2
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.6
Sample A Female 8.8
Sample B Female 6.7
Sample C Male 8.7
Sample D Male 6.6
Ventral hippocampus
nTPM: 6.8
Samples: 4

Max nTPM: 8.5
Min nTPM: 5.7
Sample A Female 6.0
Sample B Female 6.8
Sample C Male 8.5
Sample D Male 5.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.6
Samples: 4

Max nTPM: 3.2
Min nTPM: 1.9
Sample A Male 3.2
Sample B Male 1.9
Sample C Female 2.6
Sample D Female 2.7
Hippocampal formation
nTPM: 2.7
Samples: 4

Max nTPM: 3.6
Min nTPM: 1.6
Sample A Male 2.9
Sample B Male 3.6
Sample C Female 1.6
Sample D Female 2.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69134181 Antisense, RP_050321_02_E01, Mouse strain C57BL/6J (56 days, male) 0.8

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