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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
83.8
nTPM
Monaco:
81.3
nTPM
Schmiedel:
210.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
83.8
HPA sample
nTPM
gdT-cell nTPM: 55.6
Samples: 6
Max nTPM: 63.7
Min nTPM: 40.8
P10809_1007
49.9
P10809_1022
57.3
P10809_1041
40.8
P10809_1060
63.6
P10809_1077
58.5
P10809_1098
63.7
MAIT T-cell nTPM: 83.8
Samples: 6
Max nTPM: 118.8
Min nTPM: 63.8
P10809_1006
63.8
P10809_1024
94.0
P10809_1043
64.3
P10809_1062
83.4
P10809_1083
78.3
P10809_1097
118.8
Memory CD4 T-cell nTPM: 66.1
Samples: 6
Max nTPM: 79.9
Min nTPM: 53.9
P10809_1014
53.9
P10809_1026
61.3
P10809_1045
60.4
P10809_1064
69.8
P10809_1086
79.9
P10809_1113
71.5
Memory CD8 T-cell nTPM: 65.4
Samples: 5
Max nTPM: 81.2
Min nTPM: 54.4
P10809_1012
54.4
P10809_1027
58.8
P10809_1046
62.5
P10809_1065
69.9
P10809_1111
81.2
Naive CD4 T-cell nTPM: 63.7
Samples: 6
Max nTPM: 70.2
Min nTPM: 55.8
P10809_1015
55.8
P10809_1030
65.7
P10809_1049
57.6
P10809_1068
65.9
P10809_1085
67.0
P10809_1112
70.2
Naive CD8 T-cell nTPM: 75.2
Samples: 6
Max nTPM: 88.0
Min nTPM: 65.2
P10809_1016
69.1
P10809_1031
88.0
P10809_1050
65.2
P10809_1069
73.7
P10809_1087
78.6
P10809_1110
76.5
T-reg nTPM: 75.8
Samples: 6
Max nTPM: 108.9
Min nTPM: 65.2
P10809_1018
68.1
P10809_1037
65.2
P10809_1056
69.4
P10809_1075
108.9
P10809_1094
75.1
P10809_1106
68.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 51.4
Samples: 4
Max nTPM: 69.2
Min nTPM: 32.4
RHH5202_R3573
69.2
RHH5230_R3602
38.0
RHH5259_R3631
32.4
RHH5288_R3660
66.1
Effector memory CD8 T-cell nTPM: 54.9
Samples: 4
Max nTPM: 63.1
Min nTPM: 48.3
RHH5203_R3574
48.3
RHH5231_R3603
57.6
RHH5260_R3632
63.1
RHH5289_R3661
50.4
MAIT T-cell nTPM: 71.1
Samples: 4
Max nTPM: 94.6
Min nTPM: 46.3
RHH5233_R3605
94.6
RHH5205_R3576
46.3
RHH5262_R3634
53.0
RHH5297_R3663
90.4
Memory CD4 T-cell TFH nTPM: 73.7
Samples: 4
Max nTPM: 97.3
Min nTPM: 58.3
RHH5300_R3666
80.3
RHH5236_R3608
97.3
RHH5265_R3637
58.3
RHH5208_R3579
58.7
Memory CD4 T-cell Th1 nTPM: 69.1
Samples: 4
Max nTPM: 93.9
Min nTPM: 36.6
RHH5210_R3581
61.2
RHH5302_R3668
93.9
RHH5238_R3610
36.6
RHH5267_R3639
84.8
Memory CD4 T-cell Th1/Th17 nTPM: 56.6
Samples: 4
Max nTPM: 70.7
Min nTPM: 42.7
RHH5303_R3669
70.7
RHH5211_R3582
69.0
RHH5239_R3611
44.1
RHH5268_R3640
42.7
Memory CD4 T-cell Th17 nTPM: 51.6
Samples: 4
Max nTPM: 69.7
Min nTPM: 32.5
RHH5304_R3670
69.7
RHH5212_R3583
66.4
RHH5240_R3612
32.5
RHH5269_R3641
37.6
Memory CD4 T-cell Th2 nTPM: 48.5
Samples: 4
Max nTPM: 62.1
Min nTPM: 39.1
RHH5305_R3671
47.3
RHH5213_R3584
62.1
RHH5241_R3613
45.6
RHH5270_R3642
39.1
Naive CD4 T-cell nTPM: 67.2
Samples: 4
Max nTPM: 83.4
Min nTPM: 49.2
RHH5306_R3672
83.4
RHH5214_R3585
67.6
RHH5242_R3614
49.2
RHH5271_R3643
68.4
Naive CD8 T-cell nTPM: 43.5
Samples: 4
Max nTPM: 54.3
Min nTPM: 21.1
RHH5201_R3572
21.1
RHH5229_R3601
46.6
RHH5258_R3630
52.1
RHH5287_R3659
54.3
Non-Vd2 gdTCR nTPM: 57.5
Samples: 4
Max nTPM: 83.2
Min nTPM: 25.3
RHH5235_R3607
25.3
RHH5264_R3636
83.2
RHH5207_R3578
60.3
RHH5299_R3665
61.0
T-reg nTPM: 71.1
Samples: 4
Max nTPM: 123.8
Min nTPM: 35.8
RHH5301_R3667
123.8
RHH5237_R3609
89.0
RHH5266_R3638
35.8
RHH5209_R3580
35.9
Terminal effector memory CD4 T-cell nTPM: 62.1
Samples: 2
Max nTPM: 96.4
Min nTPM: 27.7
RHH5243_R3615
27.7
RHH5272_R3644
96.4
Terminal effector memory CD8 T-cell nTPM: 81.3
Samples: 4
Max nTPM: 91.9
Min nTPM: 59.8
RHH5232_R3604
84.3
RHH5204_R3575
91.9
RHH5261_R3633
59.8
RHH5296_R3662
89.3
Vd2 gdTCR nTPM: 78.8
Samples: 4
Max nTPM: 108.0
Min nTPM: 61.9
RHH5234_R3606
66.9
RHH5206_R3577
78.5
RHH5263_R3635
61.9
RHH5298_R3664
108.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
