HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:10.5 nTPM
HPA Brain:19.7 nTPM
GTEx:10.5 nTPM
FANTOM5:65.8 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:20.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027620
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 18.6
1898 Male, age 80, left hemisphere 22.5
1855 Male, age 76, left hemisphere 20.7
2621 Female, age 67, right hemisphere 20.4
2148 Female, age 91, left hemisphere 20.1
2529 Female, age 94, left hemisphere 14.4
1911 Female, age 85, right hemisphere 13.7
Dentate gyrus
nTPM: 18.5
2530 Female, age 94, left hemisphere 21.6
2010 Male, age 76, both hemispheres 18.6
1927 Female, age 91, both hemispheres 18.4
2531 Female, age 67, both hemispheres 17.6
2246 Female, age 85, both hemispheres 17.4
2528 Male, age 74, both hemispheres 17.3
Entorhinal gyrus
nTPM: 19.7
2613 Female, age 94, left hemisphere 24.3
2764 Male, age 80, right hemisphere 20.9
1787 Male, age 76, left hemisphere 18.7
1938 Female, age 85, left hemisphere 18.6
2117 Female, age 91, right hemisphere 18.6
2686 Male, age 75, right hemisphere 16.8
Hippocampus, CA1
nTPM: 18.8
2749 Male, age 80, left hemisphere 26.5
1873 Female, age 85, both hemispheres 18.1
2045 Male, age 76, both hemispheres 16.7
2527 Male, age 74, both hemispheres 16.7
2082 Female, age 91, right hemisphere 16.2
Hippocampus, CA2
nTPM: 19.0
1963 Male, age 80, left hemisphere 24.2
1892 Male, age 76, both hemispheres 21.9
2437 Female, age 94, left hemisphere 19.0
2113 Female, age 91, right hemisphere 16.9
1940 Female, age 85, left hemisphere 16.3
2249 Male, age 74, both hemispheres 15.7
Hippocampus, CA3
nTPM: 18.4
2620 Female, age 94, left hemisphere 23.0
2861 Female, age 67, both hemispheres 20.2
2137 Male, age 80, left hemisphere 17.9
2436 Male, age 74, both hemispheres 17.8
1867 Male, age 76, both hemispheres 16.2
1891 Female, age 85, both hemispheres 15.1
Parahippocampal cortex
nTPM: 17.6
1850 Male, age 80, both hemispheres 20.0
2245 Female, age 91, both hemispheres 19.3
2532 Female, age 72, left hemisphere 19.3
1990 Female, age 91, right hemisphere 18.2
2622 Female, age 67, right hemisphere 18.1
2692 Male, age 74, both hemispheres 18.1
2693 Female, age 94, both hemispheres 17.3
1933 Female, age 85, both hemispheres 16.7
2250 Female, age 67, right hemisphere 15.3
2018 Male, age 76, both hemispheres 14.1
Perirhinal gyrus
nTPM: 19.6
1794 Male, age 80, right hemisphere 22.1
1847 Female, age 91, left hemisphere 20.4
2521 Female, age 94, right hemisphere 20.3
1841 Female, age 85, right hemisphere 17.6
2848 Male, age 76, right hemisphere 17.4
Subiculum
nTPM: 16.5
1901 Male, age 80, both hemispheres 18.3
1977 Female, age 85, both hemispheres 18.2
2619 Male, age 74, both hemispheres 17.5
2438 Female, age 94, left hemisphere 16.0
2729 Female, age 91, right hemisphere 15.5
2042 Male, age 76, both hemispheres 13.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 19.7
Min nTPM: 6.0
Std nTPM: 2.6
Median nTPM: 10.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 19.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 19.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 18.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 18.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 17.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 15.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 15.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 15.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 15.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 15.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 15.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.8
FF:10169-103B7 60 years, female 88.2
FF:10153-102I9 76 years, female 43.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Subiculum
nTPM: 15.9
Samples: 4

Max nTPM: 19.0
Min nTPM: 12.8
Sample A Female 19.0
Sample B Female 14.2
Sample C Male 17.5
Sample D Male 12.8
Dorsal hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 18.1
Min nTPM: 11.3
Sample A Female 17.0
Sample B Female 15.6
Sample C Male 18.1
Sample D Male 11.3
Entorhinal cortex
nTPM: 15.9
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.7
Sample A Female 17.2
Sample B Female 15.0
Sample C Male 17.8
Sample D Male 13.7
Ventral hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 23.6
Min nTPM: 11.8
Sample A Female 15.4
Sample B Female 11.8
Sample C Male 23.6
Sample D Male 13.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.4
Samples: 4

Max nTPM: 20.9
Min nTPM: 15.6
Sample A Male 20.1
Sample B Male 15.6
Sample C Female 17.1
Sample D Female 20.9
Hippocampal formation
nTPM: 20.8
Samples: 4

Max nTPM: 23.5
Min nTPM: 18.1
Sample A Male 18.1
Sample B Male 21.7
Sample C Female 23.5
Sample D Female 19.9

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