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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
132.6
nTPM
HPA Brain:
102.5
nTPM
GTEx:
132.6
nTPM
FANTOM5:
117.4
Scaled Tags Per Million
Pig:
179.9
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
102.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 69.5
2219
Male, age 76, both hemispheres
89.8
1870
Female, age 42, unknown
79.4
2666
Male, age 74, left hemisphere
73.5
2019
Male, age 18, unknown
72.0
1827
Male, age 72, unknown
70.5
2411
Female, age 72, unknown
68.1
1830
Male, age 51, unknown
66.9
1833
Male, age 53, unknown
65.2
2828
Female, age 72, unknown
61.8
2586
Male, age 75, left hemisphere
48.2
Dorsal raphe nucleus nTPM: 57.7
1828
Male, age 53, unknown
74.0
2750
Male, age 76, both hemispheres
64.8
2047
Male, age 72, unknown
56.3
2298
Female, age 72, unknown
50.7
2016
Female, age 72, unknown
42.9
Inferior colliculus nTPM: 63.3
2849
Male, age 72, unknown
88.2
1890
Male, age 53, unknown
65.2
1848
Female, age 42, unknown
53.1
2097
Female, age 72, unknown
46.8
Median raphe nucleus nTPM: 102.5
2220
Male, age 76, midline
102.5
Periaquaductal grey, anterior nTPM: 66.6
1795
Male, age 51, unknown
71.4
1947
Male, age 18, unknown
65.4
2502
Female, age 75, unknown
62.9
Periaquaductal grey, dorsal nTPM: 64.8
2850
Male, age 76, both hemispheres
89.1
1831
Male, age 72, unknown
59.1
2464
Female, age 72, unknown
56.8
1840
Male, age 53, unknown
54.2
Periaquaductal grey, lateral nTPM: 58.7
2272
Male, age 74, both hemispheres
63.5
2140
Male, age 76, both hemispheres
61.5
2053
Male, age 18, unknown
51.1
Pretectal area nTPM: 74.0
1944
Female, age 72, unknown
97.2
1817
Female, age 42, unknown
89.7
2007
Male, age 72, unknown
88.1
1816
Male, age 51, unknown
85.2
2667
Female, age 75, unknown
77.8
1815
Male, age 53, unknown
77.0
2273
Male, age 74, both hemispheres
67.3
2407
Male, age 75, both hemispheres
65.7
2224
Female, age 72, unknown
65.0
2825
Male, age 18, unknown
58.8
2316
Male, age 76, right hemisphere
42.2
Red nucleus nTPM: 73.6
2725
Female, age 75, unknown
106.7
2785
Male, age 18, unknown
81.6
2503
Female, age 72, unknown
81.3
1865
Male, age 51, unknown
76.8
1954
Female, age 42, unknown
75.4
2823
Male, age 76, right hemisphere
71.0
2227
Male, age 72, unknown
68.9
1821
Female, age 72, unknown
68.1
1904
Male, age 53, unknown
65.1
2588
Male, age 74, left hemisphere
64.3
2584
Male, age 75, left hemisphere
62.5
2769
Male, age 72, unknown
61.3
Substantia nigra nTPM: 83.1
1916
Female, age 42, unknown
132.3
2409
Female, age 72, unknown
98.7
2699
Male, age 18, unknown
95.4
1941
Male, age 53, unknown
93.3
2665
Male, age 74, both hemispheres
82.1
1889
Female, age 72, unknown
81.6
1851
Male, age 51, unknown
79.1
2241
Male, age 72, unknown
61.7
2583
Male, age 75, right hemisphere
55.4
2590
Female, age 75, unknown
51.0
Superior colliculus nTPM: 62.2
1913
Female, age 42, unknown
70.3
2087
Female, age 72, unknown
68.1
1796
Male, age 53, unknown
67.1
2587
Male, age 74, left hemisphere
67.0
2668
Female, age 75, unknown
64.8
2261
Male, age 18, unknown
63.1
1995
Male, age 72, unknown
60.7
1895
Male, age 76, right hemisphere
56.2
1839
Male, age 51, unknown
54.2
2664
Male, age 75, both hemispheres
51.0
Ventral tegmental area nTPM: 78.8
2218
Male, age 76, both hemispheres
102.3
1915
Female, age 42, unknown
86.0
2410
Female, age 72, unknown
84.1
2223
Female, age 72, unknown
73.9
1942
Male, age 51, unknown
68.8
2021
Male, age 53, unknown
57.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
132.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 132.6
Samples: 139
Max nTPM: 320.4
Min nTPM: 32.0
Std nTPM: 37.6
Median nTPM: 126.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
320.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
229.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
228.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
212.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
212.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
196.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
196.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
190.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
189.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
188.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
185.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
185.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
185.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
185.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
184.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
184.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
179.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
175.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
172.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
171.8
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
163.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
163.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
162.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
161.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
159.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
158.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
158.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
158.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
157.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
156.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
155.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
155.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
154.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
154.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
153.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
152.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
152.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
150.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
150.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
149.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
149.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
147.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
145.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
144.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
144.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
142.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
142.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
142.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
141.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
141.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
140.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
139.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
138.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
138.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
137.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
137.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
136.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
133.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
132.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
131.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
131.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
129.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
129.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
129.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
128.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
127.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
127.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
127.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
126.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
126.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
126.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
125.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
124.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
124.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
123.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
123.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
122.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
122.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
122.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
122.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
121.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
121.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
121.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
120.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
119.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
118.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
118.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
117.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
117.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
116.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
116.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
116.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
116.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
115.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
115.6
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
115.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
113.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
112.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
111.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
111.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
111.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
110.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
110.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
110.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
109.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
108.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
107.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
106.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
105.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
104.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
103.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
102.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
101.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
101.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
101.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
101.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
100.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
99.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
99.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
96.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
95.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
95.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
95.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
95.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
93.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
90.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
90.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
90.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
88.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
86.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
85.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
84.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
83.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
82.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
81.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
76.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
63.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
54.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
32.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.