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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
85.2
nTPM
Monaco:
93.7
nTPM
Schmiedel:
95.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.2
HPA sample
nTPM
gdT-cell nTPM: 73.9
Samples: 6
Max nTPM: 87.1
Min nTPM: 56.6
P10809_1007
56.6
P10809_1022
86.7
P10809_1041
87.1
P10809_1060
71.7
P10809_1077
70.2
P10809_1098
71.2
MAIT T-cell nTPM: 77.9
Samples: 6
Max nTPM: 105.2
Min nTPM: 39.9
P10809_1006
39.9
P10809_1024
105.2
P10809_1043
84.3
P10809_1062
67.4
P10809_1083
91.5
P10809_1097
79.3
Memory CD4 T-cell nTPM: 73.9
Samples: 6
Max nTPM: 85.2
Min nTPM: 54.6
P10809_1014
54.6
P10809_1026
78.4
P10809_1045
85.2
P10809_1064
67.9
P10809_1086
78.4
P10809_1113
79.0
Memory CD8 T-cell nTPM: 82.0
Samples: 5
Max nTPM: 101.5
Min nTPM: 60.5
P10809_1012
60.5
P10809_1027
101.5
P10809_1046
92.3
P10809_1065
78.6
P10809_1111
77.1
Naive CD4 T-cell nTPM: 84.4
Samples: 6
Max nTPM: 120.9
Min nTPM: 49.5
P10809_1015
49.5
P10809_1030
99.1
P10809_1049
120.9
P10809_1068
86.7
P10809_1085
79.6
P10809_1112
70.6
Naive CD8 T-cell nTPM: 70.6
Samples: 6
Max nTPM: 78.8
Min nTPM: 54.9
P10809_1016
54.9
P10809_1031
69.7
P10809_1050
70.7
P10809_1069
78.8
P10809_1087
72.8
P10809_1110
76.5
T-reg nTPM: 85.2
Samples: 6
Max nTPM: 132.4
Min nTPM: 52.7
P10809_1018
55.9
P10809_1037
87.0
P10809_1056
132.4
P10809_1075
52.7
P10809_1094
115.2
P10809_1106
68.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 74.6
Samples: 4
Max nTPM: 107.1
Min nTPM: 57.3
RHH5202_R3573
107.1
RHH5230_R3602
75.6
RHH5259_R3631
57.3
RHH5288_R3660
58.2
Effector memory CD8 T-cell nTPM: 93.6
Samples: 4
Max nTPM: 124.9
Min nTPM: 66.7
RHH5203_R3574
124.9
RHH5231_R3603
91.7
RHH5260_R3632
66.7
RHH5289_R3661
91.0
MAIT T-cell nTPM: 80.3
Samples: 4
Max nTPM: 89.9
Min nTPM: 64.6
RHH5233_R3605
87.7
RHH5205_R3576
79.0
RHH5262_R3634
89.9
RHH5297_R3663
64.6
Memory CD4 T-cell TFH nTPM: 80.1
Samples: 4
Max nTPM: 108.8
Min nTPM: 62.6
RHH5300_R3666
62.6
RHH5236_R3608
108.8
RHH5265_R3637
74.6
RHH5208_R3579
74.4
Memory CD4 T-cell Th1 nTPM: 58.1
Samples: 4
Max nTPM: 72.9
Min nTPM: 33.9
RHH5210_R3581
72.9
RHH5302_R3668
58.6
RHH5238_R3610
33.9
RHH5267_R3639
67.1
Memory CD4 T-cell Th1/Th17 nTPM: 69.8
Samples: 4
Max nTPM: 87.9
Min nTPM: 54.4
RHH5303_R3669
65.8
RHH5211_R3582
87.9
RHH5239_R3611
54.4
RHH5268_R3640
71.1
Memory CD4 T-cell Th17 nTPM: 83.5
Samples: 4
Max nTPM: 111.0
Min nTPM: 55.6
RHH5304_R3670
82.4
RHH5212_R3583
111.0
RHH5240_R3612
85.0
RHH5269_R3641
55.6
Memory CD4 T-cell Th2 nTPM: 79.8
Samples: 4
Max nTPM: 88.7
Min nTPM: 72.7
RHH5305_R3671
77.5
RHH5213_R3584
80.3
RHH5241_R3613
88.7
RHH5270_R3642
72.7
Naive CD4 T-cell nTPM: 74.7
Samples: 4
Max nTPM: 91.8
Min nTPM: 64.0
RHH5306_R3672
65.3
RHH5214_R3585
91.8
RHH5242_R3614
64.0
RHH5271_R3643
77.6
Naive CD8 T-cell nTPM: 79.6
Samples: 4
Max nTPM: 114.0
Min nTPM: 53.0
RHH5201_R3572
114.0
RHH5229_R3601
53.0
RHH5258_R3630
72.3
RHH5287_R3659
79.1
Non-Vd2 gdTCR nTPM: 93.7
Samples: 4
Max nTPM: 108.2
Min nTPM: 75.8
RHH5235_R3607
94.9
RHH5264_R3636
95.9
RHH5207_R3578
108.2
RHH5299_R3665
75.8
T-reg nTPM: 84.1
Samples: 4
Max nTPM: 96.1
Min nTPM: 72.5
RHH5301_R3667
72.5
RHH5237_R3609
96.1
RHH5266_R3638
78.7
RHH5209_R3580
88.9
Terminal effector memory CD4 T-cell nTPM: 70.3
Samples: 2
Max nTPM: 72.1
Min nTPM: 68.5
RHH5243_R3615
72.1
RHH5272_R3644
68.5
Terminal effector memory CD8 T-cell nTPM: 90.2
Samples: 4
Max nTPM: 107.2
Min nTPM: 81.4
RHH5232_R3604
107.2
RHH5204_R3575
90.2
RHH5261_R3633
81.4
RHH5296_R3662
82.1
Vd2 gdTCR nTPM: 82.3
Samples: 4
Max nTPM: 101.0
Min nTPM: 44.9
RHH5234_R3606
88.4
RHH5206_R3577
101.0
RHH5263_R3635
94.8
RHH5298_R3664
44.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
