HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:54.8 nTPM
HPA Brain:60.2 nTPM
GTEx:54.8 nTPM
FANTOM5:73.6 Scaled Tags Per Million
Pig:90.0 nTPM
Mouse:63.9 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041925Antibody HPA043219
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.2
Sample id Sample description nTPM
Hippocampus
nTPM: 53.2
2621 Female, age 67, right hemisphere 68.4
2148 Female, age 91, left hemisphere 54.4
1898 Male, age 80, left hemisphere 51.9
2529 Female, age 94, left hemisphere 50.2
1855 Male, age 76, left hemisphere 47.9
1911 Female, age 85, right hemisphere 46.1
Dentate gyrus
nTPM: 50.0
1927 Female, age 91, both hemispheres 61.3
2530 Female, age 94, left hemisphere 60.3
2531 Female, age 67, both hemispheres 51.8
2010 Male, age 76, both hemispheres 45.7
2246 Female, age 85, both hemispheres 43.8
2528 Male, age 74, both hemispheres 37.2
Entorhinal gyrus
nTPM: 47.2
2613 Female, age 94, left hemisphere 57.9
1787 Male, age 76, left hemisphere 50.6
2686 Male, age 75, right hemisphere 50.0
2764 Male, age 80, right hemisphere 45.4
1938 Female, age 85, left hemisphere 42.8
2117 Female, age 91, right hemisphere 36.8
Hippocampus, CA1
nTPM: 54.7
2749 Male, age 80, left hemisphere 90.5
1873 Female, age 85, both hemispheres 49.6
2527 Male, age 74, both hemispheres 48.1
2045 Male, age 76, both hemispheres 43.6
2082 Female, age 91, right hemisphere 41.5
Hippocampus, CA2
nTPM: 48.2
1963 Male, age 80, left hemisphere 65.6
1892 Male, age 76, both hemispheres 61.4
2437 Female, age 94, left hemisphere 47.9
2113 Female, age 91, right hemisphere 40.5
2249 Male, age 74, both hemispheres 39.3
1940 Female, age 85, left hemisphere 34.3
Hippocampus, CA3
nTPM: 60.2
2137 Male, age 80, left hemisphere 84.1
2861 Female, age 67, both hemispheres 82.8
2620 Female, age 94, left hemisphere 62.6
1867 Male, age 76, both hemispheres 55.9
2436 Male, age 74, both hemispheres 40.1
1891 Female, age 85, both hemispheres 35.9
Parahippocampal cortex
nTPM: 43.5
2245 Female, age 91, both hemispheres 60.2
2622 Female, age 67, right hemisphere 50.0
2250 Female, age 67, right hemisphere 43.7
2018 Male, age 76, both hemispheres 41.8
2532 Female, age 72, left hemisphere 41.2
2693 Female, age 94, both hemispheres 41.2
1933 Female, age 85, both hemispheres 40.4
2692 Male, age 74, both hemispheres 39.5
1990 Female, age 91, right hemisphere 38.8
1850 Male, age 80, both hemispheres 38.1
Perirhinal gyrus
nTPM: 44.5
1794 Male, age 80, right hemisphere 50.2
1847 Female, age 91, left hemisphere 49.4
2521 Female, age 94, right hemisphere 44.9
2848 Male, age 76, right hemisphere 39.4
1841 Female, age 85, right hemisphere 38.6
Subiculum
nTPM: 43.2
1901 Male, age 80, both hemispheres 50.8
2619 Male, age 74, both hemispheres 46.5
2438 Female, age 94, left hemisphere 42.7
1977 Female, age 85, both hemispheres 41.6
2042 Male, age 76, both hemispheres 41.3
2729 Female, age 91, right hemisphere 36.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.8
Samples: 197

Max nTPM: 142.7
Min nTPM: 12.7
Std nTPM: 23.0
Median nTPM: 53.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 142.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 126.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 118.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 117.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 115.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 109.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 108.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 107.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 107.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 99.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 96.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.6
FF:10153-102I9 76 years, female 74.5
FF:10169-103B7 60 years, female 72.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 90.0
Pig sample Sample description nTPM
Subiculum
nTPM: 83.4
Samples: 4

Max nTPM: 109.7
Min nTPM: 69.5
Sample A Female 109.7
Sample B Female 73.6
Sample C Male 80.6
Sample D Male 69.5
Dorsal hippocampus
nTPM: 90.0
Samples: 4

Max nTPM: 112.8
Min nTPM: 77.4
Sample A Female 112.8
Sample B Female 88.0
Sample C Male 81.6
Sample D Male 77.4
Entorhinal cortex
nTPM: 89.7
Samples: 4

Max nTPM: 94.5
Min nTPM: 82.1
Sample A Female 90.7
Sample B Female 91.3
Sample C Male 94.5
Sample D Male 82.1
Ventral hippocampus
nTPM: 85.1
Samples: 4

Max nTPM: 101.0
Min nTPM: 58.7
Sample A Female 82.1
Sample B Female 58.7
Sample C Male 101.0
Sample D Male 98.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.8
Samples: 4

Max nTPM: 65.8
Min nTPM: 58.1
Sample A Male 58.1
Sample B Male 64.1
Sample C Female 65.8
Sample D Female 59.3
Hippocampal formation
nTPM: 63.9
Samples: 4

Max nTPM: 73.2
Min nTPM: 55.9
Sample A Male 73.2
Sample B Male 59.8
Sample C Female 55.9
Sample D Female 66.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
583852 Antisense, RP_040831_01_B03, Mouse strain C57BL/6J (56 days, male) 3.5

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