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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
94.0
nTPM
GTEx:
94.0
nTPM
FANTOM5:
86.5
Scaled Tags Per Million
Mouse:
135.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
94.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 94.0
Samples: 105
Max nTPM: 270.1
Min nTPM: 45.9
Std nTPM: 33.2
Median nTPM:
308_1
70 years, female
270.1
137_1
83 years, male
192.1
495_1
57 years, female
178.7
17_1
71 years, male
168.7
491_1
89 years, female
165.9
315_1
62 years, female
155.4
501_1
88 years, male
150.9
120_1
70 years, female
146.1
109_1
81 years, female
144.5
43_1
64 years, female
131.5
288_1
66 years, female
126.5
4_1
88 years, female
126.4
89_1
63 years, male
126.3
149_1
88 years, male
125.4
518_1
75 years, female
123.4
413_1
59 years, female
121.8
2_1
77 years, female
116.3
466_1
57 years, female
114.9
313_1
79 years, female
113.3
295_1
61 years, female
113.2
394_1
75 years, female
112.6
307_1
66 years, female
110.1
32_1
67 years, male
109.7
324_1
76 years, male
109.2
162_1
79 years, female
108.3
18_1
88 years, male
106.2
314_1
67 years, male
105.2
117_1
61 years, male
104.8
266_1
85 years, male
104.2
490_1
67 years, female
102.6
415_1
77 years, female
102.5
81_1
67 years, male
102.4
251_1
78 years, male
101.6
142_1
61 years, female
101.0
264_1
73 years, female
100.1
254_1
77 years, female
99.9
316_1
62 years, male
98.5
389_1
86 years, female
97.9
139_1
64 years, female
97.4
414_1
84 years, female
95.7
41_1
94 years, female
95.2
119_1
70 years, female
93.7
468_1
89 years, male
92.9
9_1
66 years, female
92.8
35_1
74 years, female
92.1
351_1
91 years, male
91.2
396_1
62 years, male
89.4
173_1
67 years, male
89.2
506_1
65 years, male
89.0
115_1
83 years, male
88.3
126_1
63 years, male
88.2
348_1
84 years, male
87.9
376_1
75 years, female
87.4
517_1
88 years, male
87.2
99_1
64 years, male
86.8
286_1
68 years, female
86.8
503_1
68 years, male
86.4
322_1
76 years, male
86.3
292_1
71 years, male
85.9
499_1
55 years, female
85.9
447_1
81 years, male
85.6
217_1
76 years, male
85.4
189_1
76 years, male
84.5
406_1
79 years, male
84.4
291_1
76 years, male
84.0
42_1
85 years, male
83.7
265_1
87 years, male
81.8
404_1
82 years, female
81.4
243_1
75 years, male
79.9
145_1
84 years, male
78.8
452_1
88 years, female
78.5
246_1
77 years, male
77.1
349_1
83 years, male
77.0
386_1
76 years, male
76.9
177_1
74 years, male
76.7
377_1
82 years, female
76.6
311_1
78 years, male
76.5
375_1
74 years, female
75.9
317_1
60 years, male
75.3
320_1
89 years, female
73.1
526_1
61 years, male
72.2
229_1
69 years, female
70.7
319_1
81 years, male
69.7
293_1
68 years, female
69.2
384_1
83 years, male
67.8
153_1
70 years, female
66.8
480_1
63 years, male
65.7
347_1
72 years, male
65.0
6_1
73 years, female
64.3
405_1
91 years, male
63.6
353_1
82 years, female
62.3
425_1
59 years, female
62.3
352_1
62 years, male
60.2
335_1
73 years, female
59.5
350_1
84 years, female
59.5
163_1
78 years, male
58.8
355_1
70 years, female
57.1
318_1
68 years, male
55.2
356_1
87 years, female
55.2
172_1
72 years, female
54.8
379_1
60 years, male
54.8
354_1
81 years, female
54.2
237_1
82 years, male
50.9
321_1
62 years, female
46.7
218_1
71 years, female
45.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
