HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:264.4 nTPM
HPA Brain:109.5 nTPM
GTEx:264.4 nTPM
FANTOM5:356.9 Scaled Tags Per Million
Mouse:836.1 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042574
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.5
Sample id Sample description nTPM
Hippocampus
nTPM: 85.2
1898 Male, age 80, left hemisphere 127.8
2529 Female, age 94, left hemisphere 96.0
2621 Female, age 67, right hemisphere 77.9
1855 Male, age 76, left hemisphere 75.9
2148 Female, age 91, left hemisphere 70.1
1911 Female, age 85, right hemisphere 63.2
Dentate gyrus
nTPM: 77.1
2010 Male, age 76, both hemispheres 95.7
1927 Female, age 91, both hemispheres 93.0
2530 Female, age 94, left hemisphere 83.9
2246 Female, age 85, both hemispheres 72.0
2531 Female, age 67, both hemispheres 64.7
2528 Male, age 74, both hemispheres 53.5
Entorhinal gyrus
nTPM: 79.3
2764 Male, age 80, right hemisphere 93.4
2686 Male, age 75, right hemisphere 89.3
1938 Female, age 85, left hemisphere 88.1
1787 Male, age 76, left hemisphere 85.0
2613 Female, age 94, left hemisphere 63.0
2117 Female, age 91, right hemisphere 56.9
Hippocampus, CA1
nTPM: 90.0
2749 Male, age 80, left hemisphere 145.7
1873 Female, age 85, both hemispheres 84.8
2527 Male, age 74, both hemispheres 83.4
2045 Male, age 76, both hemispheres 70.2
2082 Female, age 91, right hemisphere 66.0
Hippocampus, CA2
nTPM: 92.2
1892 Male, age 76, both hemispheres 134.0
1963 Male, age 80, left hemisphere 120.1
2249 Male, age 74, both hemispheres 87.2
2437 Female, age 94, left hemisphere 82.2
1940 Female, age 85, left hemisphere 66.9
2113 Female, age 91, right hemisphere 63.0
Hippocampus, CA3
nTPM: 84.1
1867 Male, age 76, both hemispheres 103.9
2137 Male, age 80, left hemisphere 100.0
2436 Male, age 74, both hemispheres 95.6
1891 Female, age 85, both hemispheres 78.4
2861 Female, age 67, both hemispheres 70.0
2620 Female, age 94, left hemisphere 56.7
Parahippocampal cortex
nTPM: 86.2
1850 Male, age 80, both hemispheres 116.1
2532 Female, age 72, left hemisphere 95.3
2245 Female, age 91, both hemispheres 94.7
1990 Female, age 91, right hemisphere 92.6
1933 Female, age 85, both hemispheres 90.0
2250 Female, age 67, right hemisphere 89.2
2018 Male, age 76, both hemispheres 83.1
2693 Female, age 94, both hemispheres 73.0
2622 Female, age 67, right hemisphere 64.3
2692 Male, age 74, both hemispheres 63.9
Perirhinal gyrus
nTPM: 109.5
1847 Female, age 91, left hemisphere 143.1
1794 Male, age 80, right hemisphere 130.8
1841 Female, age 85, right hemisphere 111.7
2848 Male, age 76, right hemisphere 83.1
2521 Female, age 94, right hemisphere 78.9
Subiculum
nTPM: 79.2
2438 Female, age 94, left hemisphere 107.4
1901 Male, age 80, both hemispheres 97.3
1977 Female, age 85, both hemispheres 85.7
2619 Male, age 74, both hemispheres 68.1
2042 Male, age 76, both hemispheres 66.1
2729 Female, age 91, right hemisphere 50.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 264.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 264.4
Samples: 197

Max nTPM: 990.7
Min nTPM: 108.0
Std nTPM: 109.1
Median nTPM: 238.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 990.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 666.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 565.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 546.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 488.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 486.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 476.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 474.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 469.7
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 453.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 446.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 356.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 356.9
FF:10169-103B7 60 years, female 437.2
FF:10153-102I9 76 years, female 276.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 836.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 800.6
Samples: 4

Max nTPM: 895.6
Min nTPM: 750.1
Sample A Male 750.1
Sample B Male 802.4
Sample C Female 895.6
Sample D Female 754.4
Hippocampal formation
nTPM: 836.1
Samples: 4

Max nTPM: 934.9
Min nTPM: 724.7
Sample A Male 934.9
Sample B Male 724.7
Sample C Female 805.0
Sample D Female 879.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
71763912 Antisense, RP_050921_02_H02, Mouse strain C57BL/6J (56 days, male) 2.4
77340502 Antisense, RP_070116_02_D11, Mouse strain C57BL/6J (56 days, male) 2.4

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