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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
64.3
nTPM
Monaco:
115.6
nTPM
Schmiedel:
308.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.3
HPA sample
nTPM
gdT-cell nTPM: 47.9
Samples: 6
Max nTPM: 72.3
Min nTPM: 27.6
P10809_1007
27.6
P10809_1022
31.5
P10809_1041
52.2
P10809_1060
58.5
P10809_1077
45.5
P10809_1098
72.3
MAIT T-cell nTPM: 64.2
Samples: 6
Max nTPM: 102.3
Min nTPM: 33.7
P10809_1006
33.7
P10809_1024
43.8
P10809_1043
58.0
P10809_1062
91.9
P10809_1083
55.7
P10809_1097
102.3
Memory CD4 T-cell nTPM: 54.6
Samples: 6
Max nTPM: 96.9
Min nTPM: 31.5
P10809_1014
31.5
P10809_1026
38.4
P10809_1045
45.2
P10809_1064
96.9
P10809_1086
43.2
P10809_1113
72.1
Memory CD8 T-cell nTPM: 57.2
Samples: 5
Max nTPM: 79.1
Min nTPM: 31.4
P10809_1012
31.4
P10809_1027
50.8
P10809_1046
50.6
P10809_1065
79.1
P10809_1111
73.9
Naive CD4 T-cell nTPM: 62.8
Samples: 6
Max nTPM: 88.0
Min nTPM: 39.0
P10809_1015
46.3
P10809_1030
39.0
P10809_1049
72.1
P10809_1068
88.0
P10809_1085
57.1
P10809_1112
74.1
Naive CD8 T-cell nTPM: 53.0
Samples: 6
Max nTPM: 78.8
Min nTPM: 34.7
P10809_1016
40.8
P10809_1031
34.7
P10809_1050
52.8
P10809_1069
78.8
P10809_1087
45.1
P10809_1110
65.8
T-reg nTPM: 47.7
Samples: 6
Max nTPM: 68.9
Min nTPM: 24.7
P10809_1018
25.2
P10809_1037
33.8
P10809_1056
68.7
P10809_1075
65.0
P10809_1094
24.7
P10809_1106
68.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 102.5
Samples: 4
Max nTPM: 123.2
Min nTPM: 82.4
RHH5202_R3573
86.2
RHH5230_R3602
82.4
RHH5259_R3631
118.2
RHH5288_R3660
123.2
Effector memory CD8 T-cell nTPM: 110.0
Samples: 4
Max nTPM: 148.2
Min nTPM: 61.8
RHH5203_R3574
93.8
RHH5231_R3603
61.8
RHH5260_R3632
136.0
RHH5289_R3661
148.2
MAIT T-cell nTPM: 101.9
Samples: 4
Max nTPM: 127.8
Min nTPM: 76.4
RHH5233_R3605
76.4
RHH5205_R3576
86.2
RHH5262_R3634
117.1
RHH5297_R3663
127.8
Memory CD4 T-cell TFH nTPM: 87.3
Samples: 4
Max nTPM: 102.4
Min nTPM: 71.6
RHH5300_R3666
92.7
RHH5236_R3608
71.6
RHH5265_R3637
102.4
RHH5208_R3579
82.4
Memory CD4 T-cell Th1 nTPM: 88.1
Samples: 4
Max nTPM: 121.4
Min nTPM: 48.2
RHH5210_R3581
73.4
RHH5302_R3668
121.4
RHH5238_R3610
48.2
RHH5267_R3639
109.3
Memory CD4 T-cell Th1/Th17 nTPM: 95.7
Samples: 4
Max nTPM: 156.0
Min nTPM: 50.0
RHH5303_R3669
156.0
RHH5211_R3582
62.9
RHH5239_R3611
50.0
RHH5268_R3640
114.0
Memory CD4 T-cell Th17 nTPM: 84.5
Samples: 4
Max nTPM: 106.9
Min nTPM: 65.7
RHH5304_R3670
106.9
RHH5212_R3583
65.7
RHH5240_R3612
77.1
RHH5269_R3641
88.1
Memory CD4 T-cell Th2 nTPM: 86.1
Samples: 4
Max nTPM: 97.8
Min nTPM: 57.4
RHH5305_R3671
97.8
RHH5213_R3584
57.4
RHH5241_R3613
91.2
RHH5270_R3642
97.8
Naive CD4 T-cell nTPM: 102.1
Samples: 4
Max nTPM: 133.5
Min nTPM: 74.4
RHH5306_R3672
133.5
RHH5214_R3585
93.7
RHH5242_R3614
74.4
RHH5271_R3643
106.9
Naive CD8 T-cell nTPM: 115.6
Samples: 4
Max nTPM: 146.5
Min nTPM: 75.4
RHH5201_R3572
95.9
RHH5229_R3601
75.4
RHH5258_R3630
146.5
RHH5287_R3659
144.4
Non-Vd2 gdTCR nTPM: 99.8
Samples: 4
Max nTPM: 127.3
Min nTPM: 70.4
RHH5235_R3607
70.4
RHH5264_R3636
117.7
RHH5207_R3578
83.7
RHH5299_R3665
127.3
T-reg nTPM: 85.2
Samples: 4
Max nTPM: 111.4
Min nTPM: 55.6
RHH5301_R3667
111.4
RHH5237_R3609
55.6
RHH5266_R3638
104.4
RHH5209_R3580
69.5
Terminal effector memory CD4 T-cell nTPM: 100.5
Samples: 2
Max nTPM: 133.7
Min nTPM: 67.3
RHH5243_R3615
67.3
RHH5272_R3644
133.7
Terminal effector memory CD8 T-cell nTPM: 108.5
Samples: 4
Max nTPM: 138.0
Min nTPM: 77.8
RHH5232_R3604
77.8
RHH5204_R3575
93.1
RHH5261_R3633
125.0
RHH5296_R3662
138.0
Vd2 gdTCR nTPM: 110.6
Samples: 4
Max nTPM: 144.7
Min nTPM: 80.1
RHH5234_R3606
80.1
RHH5206_R3577
89.2
RHH5263_R3635
128.4
RHH5298_R3664
144.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
