HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:30.9 nTPM
HPA Brain:84.5 nTPM
GTEx:30.9 nTPM
FANTOM5:91.5 Scaled Tags Per Million
Pig:41.8 nTPM
Mouse:43.1 nTPM
Allen mouse:8.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008741
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.5
Sample id Sample description nTPM
Hippocampus
nTPM: 76.6
1855 Male, age 76, left hemisphere 84.8
1898 Male, age 80, left hemisphere 84.0
1911 Female, age 85, right hemisphere 75.5
2621 Female, age 67, right hemisphere 75.1
2148 Female, age 91, left hemisphere 70.5
2529 Female, age 94, left hemisphere 69.4
Dentate gyrus
nTPM: 76.8
2010 Male, age 76, both hemispheres 86.6
2246 Female, age 85, both hemispheres 80.3
1927 Female, age 91, both hemispheres 77.0
2530 Female, age 94, left hemisphere 75.4
2531 Female, age 67, both hemispheres 72.7
2528 Male, age 74, both hemispheres 68.9
Entorhinal gyrus
nTPM: 72.2
1938 Female, age 85, left hemisphere 76.1
2117 Female, age 91, right hemisphere 73.5
1787 Male, age 76, left hemisphere 73.1
2613 Female, age 94, left hemisphere 73.1
2764 Male, age 80, right hemisphere 72.0
2686 Male, age 75, right hemisphere 65.4
Hippocampus, CA1
nTPM: 79.8
2749 Male, age 80, left hemisphere 93.8
2045 Male, age 76, both hemispheres 84.8
1873 Female, age 85, both hemispheres 79.9
2527 Male, age 74, both hemispheres 71.6
2082 Female, age 91, right hemisphere 68.9
Hippocampus, CA2
nTPM: 74.3
1892 Male, age 76, both hemispheres 82.9
1963 Male, age 80, left hemisphere 82.5
1940 Female, age 85, left hemisphere 72.8
2249 Male, age 74, both hemispheres 71.0
2437 Female, age 94, left hemisphere 69.2
2113 Female, age 91, right hemisphere 67.3
Hippocampus, CA3
nTPM: 79.8
2137 Male, age 80, left hemisphere 88.7
1867 Male, age 76, both hemispheres 83.8
2620 Female, age 94, left hemisphere 83.6
1891 Female, age 85, both hemispheres 77.4
2436 Male, age 74, both hemispheres 73.2
2861 Female, age 67, both hemispheres 71.8
Parahippocampal cortex
nTPM: 73.4
2693 Female, age 94, both hemispheres 83.7
1850 Male, age 80, both hemispheres 82.0
2532 Female, age 72, left hemisphere 80.0
2018 Male, age 76, both hemispheres 79.6
1933 Female, age 85, both hemispheres 74.9
1990 Female, age 91, right hemisphere 72.2
2245 Female, age 91, both hemispheres 70.6
2250 Female, age 67, right hemisphere 68.4
2692 Male, age 74, both hemispheres 63.4
2622 Female, age 67, right hemisphere 59.4
Perirhinal gyrus
nTPM: 84.5
1841 Female, age 85, right hemisphere 90.6
1794 Male, age 80, right hemisphere 88.3
1847 Female, age 91, left hemisphere 85.6
2521 Female, age 94, right hemisphere 82.2
2848 Male, age 76, right hemisphere 75.9
Subiculum
nTPM: 74.6
2042 Male, age 76, both hemispheres 80.4
1977 Female, age 85, both hemispheres 79.4
1901 Male, age 80, both hemispheres 78.3
2729 Female, age 91, right hemisphere 72.1
2438 Female, age 94, left hemisphere 70.1
2619 Male, age 74, both hemispheres 66.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.9
Samples: 197

Max nTPM: 54.8
Min nTPM: 14.5
Std nTPM: 5.8
Median nTPM: 30.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 54.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 50.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 43.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 43.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 42.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 42.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 41.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 41.1
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 40.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 40.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 40.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 91.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 91.5
FF:10169-103B7 60 years, female 109.0
FF:10153-102I9 76 years, female 74.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.8
Pig sample Sample description nTPM
Subiculum
nTPM: 36.9
Samples: 4

Max nTPM: 43.2
Min nTPM: 33.9
Sample A Female 43.2
Sample B Female 34.8
Sample C Male 33.9
Sample D Male 35.7
Dorsal hippocampus
nTPM: 41.0
Samples: 4

Max nTPM: 48.2
Min nTPM: 34.4
Sample A Female 48.2
Sample B Female 41.1
Sample C Male 40.2
Sample D Male 34.4
Entorhinal cortex
nTPM: 41.8
Samples: 4

Max nTPM: 43.7
Min nTPM: 40.2
Sample A Female 41.4
Sample B Female 43.7
Sample C Male 42.0
Sample D Male 40.2
Ventral hippocampus
nTPM: 36.2
Samples: 4

Max nTPM: 43.5
Min nTPM: 30.9
Sample A Female 36.4
Sample B Female 30.9
Sample C Male 33.8
Sample D Male 43.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.1
Samples: 4

Max nTPM: 47.8
Min nTPM: 37.4
Sample A Male 37.4
Sample B Male 44.4
Sample C Female 42.9
Sample D Female 47.8
Hippocampal formation
nTPM: 40.4
Samples: 4

Max nTPM: 42.8
Min nTPM: 35.3
Sample A Male 40.8
Sample B Male 42.8
Sample C Female 42.6
Sample D Female 35.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.0
69173488 Antisense, RP_050329_01_F07, Mouse strain C57BL/6J (56 days, male) 8.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org