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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
71.8
nTPM
Monaco:
170.0
nTPM
Schmiedel:
262.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.8
HPA sample
nTPM
gdT-cell nTPM: 66.8
Samples: 6
Max nTPM: 89.7
Min nTPM: 42.4
P10809_1007
58.3
P10809_1022
42.4
P10809_1041
89.7
P10809_1060
69.6
P10809_1077
56.5
P10809_1098
84.3
MAIT T-cell nTPM: 57.7
Samples: 6
Max nTPM: 85.1
Min nTPM: 46.7
P10809_1006
50.1
P10809_1024
48.1
P10809_1043
58.6
P10809_1062
57.6
P10809_1083
46.7
P10809_1097
85.1
Memory CD4 T-cell nTPM: 29.9
Samples: 6
Max nTPM: 37.8
Min nTPM: 17.5
P10809_1014
34.4
P10809_1026
34.8
P10809_1045
37.8
P10809_1064
22.5
P10809_1086
17.5
P10809_1113
32.5
Memory CD8 T-cell nTPM: 49.0
Samples: 5
Max nTPM: 58.4
Min nTPM: 35.6
P10809_1012
49.2
P10809_1027
35.6
P10809_1046
58.4
P10809_1065
47.8
P10809_1111
54.2
Naive CD4 T-cell nTPM: 69.6
Samples: 6
Max nTPM: 88.9
Min nTPM: 57.3
P10809_1015
60.9
P10809_1030
57.3
P10809_1049
68.4
P10809_1068
63.1
P10809_1085
88.9
P10809_1112
78.8
Naive CD8 T-cell nTPM: 71.8
Samples: 6
Max nTPM: 84.1
Min nTPM: 41.3
P10809_1016
82.1
P10809_1031
78.5
P10809_1050
70.0
P10809_1069
74.5
P10809_1087
41.3
P10809_1110
84.1
T-reg nTPM: 28.8
Samples: 6
Max nTPM: 38.6
Min nTPM: 20.8
P10809_1018
30.9
P10809_1037
20.8
P10809_1056
38.6
P10809_1075
25.8
P10809_1094
31.2
P10809_1106
25.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
170.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 107.6
Samples: 4
Max nTPM: 146.8
Min nTPM: 67.1
RHH5202_R3573
134.3
RHH5230_R3602
82.0
RHH5259_R3631
67.1
RHH5288_R3660
146.8
Effector memory CD8 T-cell nTPM: 69.8
Samples: 4
Max nTPM: 98.6
Min nTPM: 39.5
RHH5203_R3574
79.5
RHH5231_R3603
98.6
RHH5260_R3632
39.5
RHH5289_R3661
61.7
MAIT T-cell nTPM: 112.3
Samples: 4
Max nTPM: 162.1
Min nTPM: 84.6
RHH5233_R3605
162.1
RHH5205_R3576
84.6
RHH5262_R3634
98.3
RHH5297_R3663
104.3
Memory CD4 T-cell TFH nTPM: 104.6
Samples: 4
Max nTPM: 147.9
Min nTPM: 83.6
RHH5300_R3666
96.2
RHH5236_R3608
90.6
RHH5265_R3637
83.6
RHH5208_R3579
147.9
Memory CD4 T-cell Th1 nTPM: 74.1
Samples: 4
Max nTPM: 122.9
Min nTPM: 42.7
RHH5210_R3581
122.9
RHH5302_R3668
85.5
RHH5238_R3610
42.7
RHH5267_R3639
45.3
Memory CD4 T-cell Th1/Th17 nTPM: 51.5
Samples: 4
Max nTPM: 62.2
Min nTPM: 34.3
RHH5303_R3669
62.2
RHH5211_R3582
61.4
RHH5239_R3611
34.3
RHH5268_R3640
48.1
Memory CD4 T-cell Th17 nTPM: 44.7
Samples: 4
Max nTPM: 61.3
Min nTPM: 33.0
RHH5304_R3670
36.2
RHH5212_R3583
61.3
RHH5240_R3612
33.0
RHH5269_R3641
48.4
Memory CD4 T-cell Th2 nTPM: 64.1
Samples: 4
Max nTPM: 89.1
Min nTPM: 47.5
RHH5305_R3671
64.4
RHH5213_R3584
47.5
RHH5241_R3613
89.1
RHH5270_R3642
55.2
Naive CD4 T-cell nTPM: 112.4
Samples: 4
Max nTPM: 140.9
Min nTPM: 98.5
RHH5306_R3672
108.4
RHH5214_R3585
98.5
RHH5242_R3614
140.9
RHH5271_R3643
101.7
Naive CD8 T-cell nTPM: 139.0
Samples: 4
Max nTPM: 177.9
Min nTPM: 93.4
RHH5201_R3572
163.0
RHH5229_R3601
93.4
RHH5258_R3630
177.9
RHH5287_R3659
121.6
Non-Vd2 gdTCR nTPM: 158.1
Samples: 4
Max nTPM: 197.9
Min nTPM: 102.7
RHH5235_R3607
102.7
RHH5264_R3636
197.9
RHH5207_R3578
141.1
RHH5299_R3665
190.5
T-reg nTPM: 62.7
Samples: 4
Max nTPM: 89.1
Min nTPM: 51.4
RHH5301_R3667
89.1
RHH5237_R3609
53.6
RHH5266_R3638
56.6
RHH5209_R3580
51.4
Terminal effector memory CD4 T-cell nTPM: 38.3
Samples: 2
Max nTPM: 52.8
Min nTPM: 23.7
RHH5243_R3615
23.7
RHH5272_R3644
52.8
Terminal effector memory CD8 T-cell nTPM: 116.7
Samples: 4
Max nTPM: 144.4
Min nTPM: 93.2
RHH5232_R3604
128.9
RHH5204_R3575
144.4
RHH5261_R3633
93.2
RHH5296_R3662
100.1
Vd2 gdTCR nTPM: 170.0
Samples: 4
Max nTPM: 224.6
Min nTPM: 131.6
RHH5234_R3606
167.0
RHH5206_R3577
156.8
RHH5263_R3635
131.6
RHH5298_R3664
224.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
