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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
179.2
nTPM
GTEx:
179.2
nTPM
FANTOM5:
729.3
Scaled Tags Per Million
Pig:
199.2
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
179.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 179.2
Samples: 105
Max nTPM: 245.3
Min nTPM: 113.5
Std nTPM: 27.0
Median nTPM:
308_1
70 years, female
245.3
229_1
69 years, female
237.7
384_1
83 years, male
235.9
495_1
57 years, female
235.6
415_1
77 years, female
235.2
466_1
57 years, female
228.8
311_1
78 years, male
224.8
321_1
62 years, female
217.9
322_1
76 years, male
216.8
352_1
62 years, male
215.5
353_1
82 years, female
215.1
246_1
77 years, male
214.1
396_1
62 years, male
210.8
218_1
71 years, female
210.1
315_1
62 years, female
209.8
414_1
84 years, female
208.3
266_1
85 years, male
207.5
265_1
87 years, male
207.4
355_1
70 years, female
206.6
251_1
78 years, male
202.4
313_1
79 years, female
202.0
17_1
71 years, male
200.8
386_1
76 years, male
198.9
177_1
74 years, male
198.7
377_1
82 years, female
198.6
35_1
74 years, female
198.4
447_1
81 years, male
197.8
139_1
64 years, female
197.3
405_1
91 years, male
195.6
41_1
94 years, female
194.7
317_1
60 years, male
193.5
356_1
87 years, female
192.7
379_1
60 years, male
192.1
501_1
88 years, male
191.6
324_1
76 years, male
191.3
237_1
82 years, male
191.1
526_1
61 years, male
190.8
499_1
55 years, female
189.7
389_1
86 years, female
189.0
316_1
62 years, male
187.7
413_1
59 years, female
186.7
350_1
84 years, female
186.5
518_1
75 years, female
186.3
320_1
89 years, female
185.1
348_1
84 years, male
185.1
425_1
59 years, female
185.1
347_1
72 years, male
184.8
254_1
77 years, female
184.6
173_1
67 years, male
183.2
153_1
70 years, female
181.9
189_1
76 years, male
179.9
452_1
88 years, female
179.1
99_1
64 years, male
178.7
354_1
81 years, female
176.1
468_1
89 years, male
175.4
119_1
70 years, female
173.3
335_1
73 years, female
172.0
406_1
79 years, male
171.7
293_1
68 years, female
171.5
307_1
66 years, female
171.5
217_1
76 years, male
170.5
376_1
75 years, female
169.8
375_1
74 years, female
169.7
163_1
78 years, male
169.5
491_1
89 years, female
169.1
81_1
67 years, male
168.9
120_1
70 years, female
167.0
286_1
68 years, female
166.4
172_1
72 years, female
166.0
115_1
83 years, male
163.9
318_1
68 years, male
163.9
351_1
91 years, male
163.9
18_1
88 years, male
163.7
126_1
63 years, male
163.5
142_1
61 years, female
163.4
137_1
83 years, male
162.7
349_1
83 years, male
162.3
394_1
75 years, female
162.0
291_1
76 years, male
160.2
292_1
71 years, male
158.9
404_1
82 years, female
157.1
288_1
66 years, female
157.0
243_1
75 years, male
156.8
264_1
73 years, female
156.6
109_1
81 years, female
155.6
162_1
79 years, female
154.0
314_1
67 years, male
154.0
319_1
81 years, male
153.3
43_1
64 years, female
152.0
117_1
61 years, male
150.9
89_1
63 years, male
149.5
295_1
61 years, female
149.4
503_1
68 years, male
148.5
6_1
73 years, female
147.6
32_1
67 years, male
147.5
480_1
63 years, male
146.4
506_1
65 years, male
142.2
4_1
88 years, female
140.7
42_1
85 years, male
140.5
517_1
88 years, male
139.4
145_1
84 years, male
135.1
9_1
66 years, female
134.9
490_1
67 years, female
126.8
149_1
88 years, male
125.7
2_1
77 years, female
113.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.