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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
430.3
nTPM
Monaco:
842.3
nTPM
Schmiedel:
2805.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
430.3
HPA sample
nTPM
gdT-cell nTPM: 251.2
Samples: 6
Max nTPM: 288.6
Min nTPM: 210.8
P10809_1007
266.1
P10809_1022
265.8
P10809_1041
247.6
P10809_1060
210.8
P10809_1077
288.6
P10809_1098
228.4
MAIT T-cell nTPM: 311.0
Samples: 6
Max nTPM: 337.1
Min nTPM: 272.3
P10809_1006
331.7
P10809_1024
337.1
P10809_1043
272.3
P10809_1062
306.3
P10809_1083
295.9
P10809_1097
322.8
Memory CD4 T-cell nTPM: 339.0
Samples: 6
Max nTPM: 400.3
Min nTPM: 258.2
P10809_1014
400.3
P10809_1026
371.2
P10809_1045
258.2
P10809_1064
355.6
P10809_1086
340.5
P10809_1113
308.0
Memory CD8 T-cell nTPM: 293.8
Samples: 5
Max nTPM: 350.1
Min nTPM: 242.2
P10809_1012
350.1
P10809_1027
287.3
P10809_1046
242.2
P10809_1065
307.4
P10809_1111
281.9
Naive CD4 T-cell nTPM: 348.1
Samples: 6
Max nTPM: 415.8
Min nTPM: 267.5
P10809_1015
415.8
P10809_1030
356.5
P10809_1049
267.5
P10809_1068
368.0
P10809_1085
362.2
P10809_1112
318.6
Naive CD8 T-cell nTPM: 307.8
Samples: 6
Max nTPM: 405.9
Min nTPM: 244.0
P10809_1016
405.9
P10809_1031
313.8
P10809_1050
244.0
P10809_1069
307.3
P10809_1087
305.3
P10809_1110
270.7
T-reg nTPM: 430.3
Samples: 6
Max nTPM: 455.4
Min nTPM: 400.1
P10809_1018
444.4
P10809_1037
424.3
P10809_1056
455.4
P10809_1075
453.4
P10809_1094
400.1
P10809_1106
404.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
842.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 800.1
Samples: 4
Max nTPM: 970.0
Min nTPM: 666.5
RHH5202_R3573
970.0
RHH5230_R3602
733.8
RHH5259_R3631
666.5
RHH5288_R3660
830.2
Effector memory CD8 T-cell nTPM: 705.5
Samples: 4
Max nTPM: 783.7
Min nTPM: 620.5
RHH5203_R3574
767.3
RHH5231_R3603
620.5
RHH5260_R3632
650.3
RHH5289_R3661
783.7
MAIT T-cell nTPM: 836.0
Samples: 4
Max nTPM: 938.9
Min nTPM: 746.0
RHH5233_R3605
938.9
RHH5205_R3576
875.2
RHH5262_R3634
784.0
RHH5297_R3663
746.0
Memory CD4 T-cell TFH nTPM: 645.0
Samples: 4
Max nTPM: 836.8
Min nTPM: 464.9
RHH5300_R3666
641.3
RHH5236_R3608
637.1
RHH5265_R3637
464.9
RHH5208_R3579
836.8
Memory CD4 T-cell Th1 nTPM: 699.0
Samples: 4
Max nTPM: 862.6
Min nTPM: 497.8
RHH5210_R3581
609.6
RHH5302_R3668
826.0
RHH5238_R3610
862.6
RHH5267_R3639
497.8
Memory CD4 T-cell Th1/Th17 nTPM: 788.9
Samples: 4
Max nTPM: 939.0
Min nTPM: 517.5
RHH5303_R3669
885.3
RHH5211_R3582
813.7
RHH5239_R3611
939.0
RHH5268_R3640
517.5
Memory CD4 T-cell Th17 nTPM: 714.9
Samples: 4
Max nTPM: 879.4
Min nTPM: 393.8
RHH5304_R3670
879.4
RHH5212_R3583
710.3
RHH5240_R3612
876.2
RHH5269_R3641
393.8
Memory CD4 T-cell Th2 nTPM: 770.7
Samples: 4
Max nTPM: 906.7
Min nTPM: 546.2
RHH5305_R3671
906.7
RHH5213_R3584
762.5
RHH5241_R3613
867.5
RHH5270_R3642
546.2
Naive CD4 T-cell nTPM: 449.8
Samples: 4
Max nTPM: 560.2
Min nTPM: 333.1
RHH5306_R3672
432.2
RHH5214_R3585
560.2
RHH5242_R3614
473.7
RHH5271_R3643
333.1
Naive CD8 T-cell nTPM: 347.8
Samples: 4
Max nTPM: 418.4
Min nTPM: 244.6
RHH5201_R3572
385.9
RHH5229_R3601
244.6
RHH5258_R3630
342.1
RHH5287_R3659
418.4
Non-Vd2 gdTCR nTPM: 597.0
Samples: 4
Max nTPM: 713.8
Min nTPM: 510.0
RHH5235_R3607
573.4
RHH5264_R3636
510.0
RHH5207_R3578
713.8
RHH5299_R3665
590.9
T-reg nTPM: 534.5
Samples: 4
Max nTPM: 633.3
Min nTPM: 393.7
RHH5301_R3667
633.3
RHH5237_R3609
598.3
RHH5266_R3638
393.7
RHH5209_R3580
512.7
Terminal effector memory CD4 T-cell nTPM: 514.2
Samples: 2
Max nTPM: 540.5
Min nTPM: 487.8
RHH5243_R3615
487.8
RHH5272_R3644
540.5
Terminal effector memory CD8 T-cell nTPM: 628.0
Samples: 4
Max nTPM: 778.5
Min nTPM: 429.9
RHH5232_R3604
622.2
RHH5204_R3575
681.3
RHH5261_R3633
429.9
RHH5296_R3662
778.5
Vd2 gdTCR nTPM: 842.3
Samples: 4
Max nTPM: 936.6
Min nTPM: 760.6
RHH5234_R3606
848.4
RHH5206_R3577
823.7
RHH5263_R3635
760.6
RHH5298_R3664
936.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.