HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.4 nTPM
HPA Brain:30.4 nTPM
GTEx:19.4 nTPM
FANTOM5:22.5 Scaled Tags Per Million
Mouse:11.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042174Antibody HPA047849
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.4
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
1911 Female, age 85, right hemisphere 30.4
2621 Female, age 67, right hemisphere 29.3
2148 Female, age 91, left hemisphere 28.9
2529 Female, age 94, left hemisphere 27.9
1855 Male, age 76, left hemisphere 26.3
1898 Male, age 80, left hemisphere 24.6
Dentate gyrus
nTPM: 27.8
2246 Female, age 85, both hemispheres 32.5
2531 Female, age 67, both hemispheres 32.3
2528 Male, age 74, both hemispheres 28.3
1927 Female, age 91, both hemispheres 25.9
2530 Female, age 94, left hemisphere 24.3
2010 Male, age 76, both hemispheres 23.3
Entorhinal gyrus
nTPM: 28.2
2686 Male, age 75, right hemisphere 30.5
2117 Female, age 91, right hemisphere 28.7
1938 Female, age 85, left hemisphere 28.4
2764 Male, age 80, right hemisphere 28.3
2613 Female, age 94, left hemisphere 26.7
1787 Male, age 76, left hemisphere 26.4
Hippocampus, CA1
nTPM: 27.2
2082 Female, age 91, right hemisphere 29.0
2527 Male, age 74, both hemispheres 28.2
1873 Female, age 85, both hemispheres 27.8
2045 Male, age 76, both hemispheres 27.1
2749 Male, age 80, left hemisphere 23.7
Hippocampus, CA2
nTPM: 27.4
2113 Female, age 91, right hemisphere 30.9
1940 Female, age 85, left hemisphere 30.3
2437 Female, age 94, left hemisphere 26.6
2249 Male, age 74, both hemispheres 25.9
1963 Male, age 80, left hemisphere 25.6
1892 Male, age 76, both hemispheres 25.1
Hippocampus, CA3
nTPM: 25.9
2861 Female, age 67, both hemispheres 29.5
1891 Female, age 85, both hemispheres 28.6
2436 Male, age 74, both hemispheres 26.4
2620 Female, age 94, left hemisphere 25.2
2137 Male, age 80, left hemisphere 23.6
1867 Male, age 76, both hemispheres 21.9
Parahippocampal cortex
nTPM: 30.4
2692 Male, age 74, both hemispheres 35.2
2622 Female, age 67, right hemisphere 34.9
2532 Female, age 72, left hemisphere 32.7
2245 Female, age 91, both hemispheres 30.2
2250 Female, age 67, right hemisphere 29.7
1933 Female, age 85, both hemispheres 29.2
1850 Male, age 80, both hemispheres 28.4
1990 Female, age 91, right hemisphere 28.0
2693 Female, age 94, both hemispheres 28.0
2018 Male, age 76, both hemispheres 27.7
Perirhinal gyrus
nTPM: 28.6
2848 Male, age 76, right hemisphere 31.3
1841 Female, age 85, right hemisphere 29.7
1794 Male, age 80, right hemisphere 29.3
1847 Female, age 91, left hemisphere 27.8
2521 Female, age 94, right hemisphere 25.0
Subiculum
nTPM: 28.0
2619 Male, age 74, both hemispheres 30.6
2729 Female, age 91, right hemisphere 29.7
1977 Female, age 85, both hemispheres 28.0
2438 Female, age 94, left hemisphere 27.3
2042 Male, age 76, both hemispheres 26.5
1901 Male, age 80, both hemispheres 26.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 35.7
Min nTPM: 8.4
Std nTPM: 4.5
Median nTPM: 19.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 35.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 35.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 32.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 31.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 30.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 29.8
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 27.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 27.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 27.5
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 27.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.5
FF:10153-102I9 76 years, female 28.5
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 12.4
Min nTPM: 11.4
Sample A Male 11.4
Sample B Male 12.4
Sample C Female 12.1
Sample D Female 11.6
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 13.9
Min nTPM: 10.1
Sample A Male 10.2
Sample B Male 10.1
Sample C Female 12.9
Sample D Female 13.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
638701 Antisense, RP_040831_02_B09, Mouse strain C57BL/6J (56 days, male) 0.1

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