We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
309.1
nTPM
Monaco:
85.2
nTPM
Schmiedel:
190.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
309.1
HPA sample
nTPM
gdT-cell nTPM: 215.5
Samples: 6
Max nTPM: 272.7
Min nTPM: 169.0
P10809_1007
219.5
P10809_1022
169.0
P10809_1041
191.2
P10809_1060
200.9
P10809_1077
272.7
P10809_1098
239.7
MAIT T-cell nTPM: 248.8
Samples: 6
Max nTPM: 318.0
Min nTPM: 183.7
P10809_1006
183.7
P10809_1024
233.6
P10809_1043
217.0
P10809_1062
276.0
P10809_1083
264.2
P10809_1097
318.0
Memory CD4 T-cell nTPM: 297.5
Samples: 6
Max nTPM: 332.4
Min nTPM: 222.5
P10809_1014
308.2
P10809_1026
292.2
P10809_1045
222.5
P10809_1064
302.9
P10809_1086
326.7
P10809_1113
332.4
Memory CD8 T-cell nTPM: 260.0
Samples: 5
Max nTPM: 300.6
Min nTPM: 208.3
P10809_1012
240.0
P10809_1027
300.6
P10809_1046
208.3
P10809_1065
252.9
P10809_1111
298.2
Naive CD4 T-cell nTPM: 252.3
Samples: 6
Max nTPM: 315.3
Min nTPM: 214.1
P10809_1015
315.3
P10809_1030
257.1
P10809_1049
214.1
P10809_1068
257.7
P10809_1085
217.3
P10809_1112
252.3
Naive CD8 T-cell nTPM: 257.7
Samples: 6
Max nTPM: 310.7
Min nTPM: 213.4
P10809_1016
293.7
P10809_1031
259.1
P10809_1050
242.4
P10809_1069
226.8
P10809_1087
310.7
P10809_1110
213.4
T-reg nTPM: 309.1
Samples: 6
Max nTPM: 345.1
Min nTPM: 272.1
P10809_1018
280.2
P10809_1037
345.1
P10809_1056
278.6
P10809_1075
337.4
P10809_1094
272.1
P10809_1106
341.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 46.5
Samples: 4
Max nTPM: 92.9
Min nTPM: 17.1
RHH5202_R3573
17.1
RHH5230_R3602
43.8
RHH5259_R3631
92.9
RHH5288_R3660
32.0
Effector memory CD8 T-cell nTPM: 47.0
Samples: 4
Max nTPM: 80.0
Min nTPM: 19.0
RHH5203_R3574
52.9
RHH5231_R3603
35.9
RHH5260_R3632
80.0
RHH5289_R3661
19.0
MAIT T-cell nTPM: 48.0
Samples: 4
Max nTPM: 66.4
Min nTPM: 29.9
RHH5233_R3605
30.9
RHH5205_R3576
66.4
RHH5262_R3634
64.7
RHH5297_R3663
29.9
Memory CD4 T-cell TFH nTPM: 41.8
Samples: 4
Max nTPM: 64.7
Min nTPM: 25.7
RHH5300_R3666
40.4
RHH5236_R3608
64.7
RHH5265_R3637
36.3
RHH5208_R3579
25.7
Memory CD4 T-cell Th1 nTPM: 75.6
Samples: 4
Max nTPM: 120.8
Min nTPM: 29.4
RHH5210_R3581
29.4
RHH5302_R3668
73.0
RHH5238_R3610
120.8
RHH5267_R3639
79.1
Memory CD4 T-cell Th1/Th17 nTPM: 58.8
Samples: 4
Max nTPM: 86.2
Min nTPM: 30.4
RHH5303_R3669
39.9
RHH5211_R3582
30.4
RHH5239_R3611
78.5
RHH5268_R3640
86.2
Memory CD4 T-cell Th17 nTPM: 54.4
Samples: 4
Max nTPM: 76.0
Min nTPM: 21.0
RHH5304_R3670
76.0
RHH5212_R3583
21.0
RHH5240_R3612
58.6
RHH5269_R3641
62.0
Memory CD4 T-cell Th2 nTPM: 65.7
Samples: 4
Max nTPM: 111.7
Min nTPM: 46.2
RHH5305_R3671
111.7
RHH5213_R3584
53.5
RHH5241_R3613
46.2
RHH5270_R3642
51.5
Naive CD4 T-cell nTPM: 50.8
Samples: 4
Max nTPM: 70.3
Min nTPM: 29.3
RHH5306_R3672
70.3
RHH5214_R3585
49.9
RHH5242_R3614
29.3
RHH5271_R3643
53.7
Naive CD8 T-cell nTPM: 56.5
Samples: 4
Max nTPM: 83.4
Min nTPM: 29.7
RHH5201_R3572
29.7
RHH5229_R3601
83.4
RHH5258_R3630
34.2
RHH5287_R3659
78.5
Non-Vd2 gdTCR nTPM: 47.8
Samples: 4
Max nTPM: 64.8
Min nTPM: 34.6
RHH5235_R3607
34.6
RHH5264_R3636
64.8
RHH5207_R3578
41.8
RHH5299_R3665
49.8
T-reg nTPM: 51.2
Samples: 4
Max nTPM: 69.5
Min nTPM: 25.1
RHH5301_R3667
57.1
RHH5237_R3609
25.1
RHH5266_R3638
69.5
RHH5209_R3580
52.9
Terminal effector memory CD4 T-cell nTPM: 46.8
Samples: 2
Max nTPM: 53.0
Min nTPM: 40.6
RHH5243_R3615
53.0
RHH5272_R3644
40.6
Terminal effector memory CD8 T-cell nTPM: 65.1
Samples: 4
Max nTPM: 104.2
Min nTPM: 16.7
RHH5232_R3604
16.7
RHH5204_R3575
93.7
RHH5261_R3633
104.2
RHH5296_R3662
45.6
Vd2 gdTCR nTPM: 85.2
Samples: 4
Max nTPM: 134.9
Min nTPM: 31.5
RHH5234_R3606
64.8
RHH5206_R3577
134.9
RHH5263_R3635
109.7
RHH5298_R3664
31.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
