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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
890.8
nTPM
Monaco:
1776.3
nTPM
Schmiedel:
1345.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
890.8
HPA sample
nTPM
gdT-cell nTPM: 359.9
Samples: 6
Max nTPM: 443.7
Min nTPM: 280.2
P10809_1007
370.1
P10809_1022
443.7
P10809_1041
406.0
P10809_1060
280.2
P10809_1077
302.0
P10809_1098
357.4
MAIT T-cell nTPM: 668.3
Samples: 6
Max nTPM: 806.1
Min nTPM: 480.7
P10809_1006
759.8
P10809_1024
806.1
P10809_1043
621.2
P10809_1062
623.8
P10809_1083
480.7
P10809_1097
718.2
Memory CD4 T-cell nTPM: 700.2
Samples: 6
Max nTPM: 951.0
Min nTPM: 480.7
P10809_1014
951.0
P10809_1026
883.9
P10809_1045
768.0
P10809_1064
511.1
P10809_1086
480.7
P10809_1113
606.5
Memory CD8 T-cell nTPM: 506.3
Samples: 5
Max nTPM: 736.9
Min nTPM: 367.3
P10809_1012
736.9
P10809_1027
521.3
P10809_1046
477.4
P10809_1065
367.3
P10809_1111
428.4
Naive CD4 T-cell nTPM: 890.8
Samples: 6
Max nTPM: 1117.7
Min nTPM: 676.3
P10809_1015
1117.7
P10809_1030
908.3
P10809_1049
1002.3
P10809_1068
855.8
P10809_1085
676.3
P10809_1112
784.5
Naive CD8 T-cell nTPM: 723.7
Samples: 6
Max nTPM: 1275.4
Min nTPM: 311.1
P10809_1016
1275.4
P10809_1031
829.7
P10809_1050
658.0
P10809_1069
598.4
P10809_1087
311.1
P10809_1110
669.4
T-reg nTPM: 591.2
Samples: 6
Max nTPM: 760.8
Min nTPM: 467.6
P10809_1018
645.8
P10809_1037
584.5
P10809_1056
760.8
P10809_1075
554.4
P10809_1094
533.9
P10809_1106
467.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1776.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1223.2
Samples: 4
Max nTPM: 1466.1
Min nTPM: 666.5
RHH5202_R3573
1386.6
RHH5230_R3602
1466.1
RHH5259_R3631
666.5
RHH5288_R3660
1373.6
Effector memory CD8 T-cell nTPM: 712.6
Samples: 4
Max nTPM: 840.9
Min nTPM: 466.0
RHH5203_R3574
840.9
RHH5231_R3603
780.9
RHH5260_R3632
466.0
RHH5289_R3661
762.4
MAIT T-cell nTPM: 1256.6
Samples: 4
Max nTPM: 1472.4
Min nTPM: 818.1
RHH5233_R3605
1472.4
RHH5205_R3576
818.1
RHH5262_R3634
1343.3
RHH5297_R3663
1392.4
Memory CD4 T-cell TFH nTPM: 1495.5
Samples: 4
Max nTPM: 1584.6
Min nTPM: 1403.2
RHH5300_R3666
1403.2
RHH5236_R3608
1505.4
RHH5265_R3637
1488.9
RHH5208_R3579
1584.6
Memory CD4 T-cell Th1 nTPM: 1209.2
Samples: 4
Max nTPM: 1681.7
Min nTPM: 914.6
RHH5210_R3581
1318.5
RHH5302_R3668
1681.7
RHH5238_R3610
922.1
RHH5267_R3639
914.6
Memory CD4 T-cell Th1/Th17 nTPM: 1146.3
Samples: 4
Max nTPM: 1468.0
Min nTPM: 844.8
RHH5303_R3669
1387.8
RHH5211_R3582
1468.0
RHH5239_R3611
844.8
RHH5268_R3640
884.6
Memory CD4 T-cell Th17 nTPM: 1230.6
Samples: 4
Max nTPM: 1417.8
Min nTPM: 1007.4
RHH5304_R3670
1417.8
RHH5212_R3583
1395.2
RHH5240_R3612
1101.8
RHH5269_R3641
1007.4
Memory CD4 T-cell Th2 nTPM: 1604.2
Samples: 4
Max nTPM: 2067.0
Min nTPM: 1281.4
RHH5305_R3671
1648.9
RHH5213_R3584
1419.4
RHH5241_R3613
2067.0
RHH5270_R3642
1281.4
Naive CD4 T-cell nTPM: 1776.3
Samples: 4
Max nTPM: 2073.5
Min nTPM: 1529.7
RHH5306_R3672
1761.2
RHH5214_R3585
1529.7
RHH5242_R3614
2073.5
RHH5271_R3643
1740.9
Naive CD8 T-cell nTPM: 1676.6
Samples: 4
Max nTPM: 2105.6
Min nTPM: 791.0
RHH5201_R3572
2019.9
RHH5229_R3601
791.0
RHH5258_R3630
2105.6
RHH5287_R3659
1790.0
Non-Vd2 gdTCR nTPM: 583.4
Samples: 4
Max nTPM: 603.2
Min nTPM: 546.3
RHH5235_R3607
546.3
RHH5264_R3636
599.8
RHH5207_R3578
603.2
RHH5299_R3665
584.1
T-reg nTPM: 1260.2
Samples: 4
Max nTPM: 1571.9
Min nTPM: 1025.5
RHH5301_R3667
1571.9
RHH5237_R3609
1310.8
RHH5266_R3638
1025.5
RHH5209_R3580
1132.4
Terminal effector memory CD4 T-cell nTPM: 829.6
Samples: 2
Max nTPM: 1036.3
Min nTPM: 622.8
RHH5243_R3615
622.8
RHH5272_R3644
1036.3
Terminal effector memory CD8 T-cell nTPM: 619.3
Samples: 4
Max nTPM: 793.6
Min nTPM: 423.1
RHH5232_R3604
698.6
RHH5204_R3575
561.7
RHH5261_R3633
423.1
RHH5296_R3662
793.6
Vd2 gdTCR nTPM: 905.5
Samples: 4
Max nTPM: 1080.6
Min nTPM: 742.4
RHH5234_R3606
1080.6
RHH5206_R3577
742.4
RHH5263_R3635
784.6
RHH5298_R3664
1014.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.