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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
43.9
nTPM
Monaco:
23.1
nTPM
Schmiedel:
40.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
43.9
HPA sample
nTPM
gdT-cell nTPM: 36.0
Samples: 6
Max nTPM: 51.3
Min nTPM: 28.4
P10809_1007
30.0
P10809_1022
40.4
P10809_1041
51.3
P10809_1060
28.4
P10809_1077
34.2
P10809_1098
31.6
MAIT T-cell nTPM: 38.2
Samples: 6
Max nTPM: 49.7
Min nTPM: 26.6
P10809_1006
26.6
P10809_1024
39.4
P10809_1043
39.3
P10809_1062
34.0
P10809_1083
40.3
P10809_1097
49.7
Memory CD4 T-cell nTPM: 39.2
Samples: 6
Max nTPM: 45.8
Min nTPM: 30.7
P10809_1014
34.8
P10809_1026
45.8
P10809_1045
42.0
P10809_1064
30.7
P10809_1086
37.8
P10809_1113
44.1
Memory CD8 T-cell nTPM: 35.3
Samples: 5
Max nTPM: 37.6
Min nTPM: 30.8
P10809_1012
30.8
P10809_1027
37.6
P10809_1046
37.1
P10809_1065
34.8
P10809_1111
36.1
Naive CD4 T-cell nTPM: 41.0
Samples: 6
Max nTPM: 50.2
Min nTPM: 31.8
P10809_1015
31.8
P10809_1030
47.7
P10809_1049
50.2
P10809_1068
38.1
P10809_1085
35.9
P10809_1112
42.5
Naive CD8 T-cell nTPM: 38.0
Samples: 6
Max nTPM: 55.4
Min nTPM: 33.1
P10809_1016
34.2
P10809_1031
55.4
P10809_1050
33.4
P10809_1069
36.9
P10809_1087
33.1
P10809_1110
34.9
T-reg nTPM: 43.9
Samples: 6
Max nTPM: 50.4
Min nTPM: 31.1
P10809_1018
31.1
P10809_1037
46.0
P10809_1056
41.1
P10809_1075
49.8
P10809_1094
44.9
P10809_1106
50.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 18.0
Samples: 4
Max nTPM: 20.8
Min nTPM: 12.5
RHH5202_R3573
12.5
RHH5230_R3602
20.8
RHH5259_R3631
18.7
RHH5288_R3660
20.0
Effector memory CD8 T-cell nTPM: 17.2
Samples: 4
Max nTPM: 26.7
Min nTPM: 8.6
RHH5203_R3574
21.2
RHH5231_R3603
12.3
RHH5260_R3632
8.6
RHH5289_R3661
26.7
MAIT T-cell nTPM: 16.5
Samples: 4
Max nTPM: 26.4
Min nTPM: 12.3
RHH5233_R3605
12.3
RHH5205_R3576
12.7
RHH5262_R3634
14.7
RHH5297_R3663
26.4
Memory CD4 T-cell TFH nTPM: 22.0
Samples: 4
Max nTPM: 27.8
Min nTPM: 16.6
RHH5300_R3666
23.1
RHH5236_R3608
27.8
RHH5265_R3637
16.6
RHH5208_R3579
20.5
Memory CD4 T-cell Th1 nTPM: 17.3
Samples: 4
Max nTPM: 29.6
Min nTPM: 9.5
RHH5210_R3581
11.1
RHH5302_R3668
29.6
RHH5238_R3610
19.0
RHH5267_R3639
9.5
Memory CD4 T-cell Th1/Th17 nTPM: 19.1
Samples: 4
Max nTPM: 28.3
Min nTPM: 7.9
RHH5303_R3669
25.9
RHH5211_R3582
28.3
RHH5239_R3611
14.1
RHH5268_R3640
7.9
Memory CD4 T-cell Th17 nTPM: 15.0
Samples: 4
Max nTPM: 22.9
Min nTPM: 11.2
RHH5304_R3670
11.5
RHH5212_R3583
14.4
RHH5240_R3612
22.9
RHH5269_R3641
11.2
Memory CD4 T-cell Th2 nTPM: 16.3
Samples: 4
Max nTPM: 26.5
Min nTPM: 11.0
RHH5305_R3671
11.7
RHH5213_R3584
11.0
RHH5241_R3613
26.5
RHH5270_R3642
16.1
Naive CD4 T-cell nTPM: 20.2
Samples: 4
Max nTPM: 27.8
Min nTPM: 12.6
RHH5306_R3672
27.8
RHH5214_R3585
19.7
RHH5242_R3614
20.7
RHH5271_R3643
12.6
Naive CD8 T-cell nTPM: 20.8
Samples: 4
Max nTPM: 30.9
Min nTPM: 7.9
RHH5201_R3572
7.9
RHH5229_R3601
20.4
RHH5258_R3630
30.9
RHH5287_R3659
23.8
Non-Vd2 gdTCR nTPM: 18.9
Samples: 4
Max nTPM: 25.4
Min nTPM: 9.0
RHH5235_R3607
9.0
RHH5264_R3636
22.5
RHH5207_R3578
18.5
RHH5299_R3665
25.4
T-reg nTPM: 20.0
Samples: 4
Max nTPM: 25.6
Min nTPM: 15.9
RHH5301_R3667
20.4
RHH5237_R3609
25.6
RHH5266_R3638
15.9
RHH5209_R3580
17.9
Terminal effector memory CD4 T-cell nTPM: 21.3
Samples: 2
Max nTPM: 27.8
Min nTPM: 14.8
RHH5243_R3615
14.8
RHH5272_R3644
27.8
Terminal effector memory CD8 T-cell nTPM: 18.5
Samples: 4
Max nTPM: 30.0
Min nTPM: 9.2
RHH5232_R3604
13.0
RHH5204_R3575
30.0
RHH5261_R3633
9.2
RHH5296_R3662
21.8
Vd2 gdTCR nTPM: 23.1
Samples: 4
Max nTPM: 28.9
Min nTPM: 14.0
RHH5234_R3606
21.6
RHH5206_R3577
28.9
RHH5263_R3635
14.0
RHH5298_R3664
27.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
