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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
63.5
nTPM
Monaco:
235.5
nTPM
Schmiedel:
351.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.5
HPA sample
nTPM
gdT-cell nTPM: 33.5
Samples: 6
Max nTPM: 44.7
Min nTPM: 14.4
P10809_1007
36.3
P10809_1022
37.6
P10809_1041
25.3
P10809_1060
14.4
P10809_1077
42.8
P10809_1098
44.7
MAIT T-cell nTPM: 50.8
Samples: 6
Max nTPM: 67.5
Min nTPM: 33.5
P10809_1006
67.5
P10809_1024
33.5
P10809_1043
48.7
P10809_1062
38.9
P10809_1083
53.5
P10809_1097
62.4
Memory CD4 T-cell nTPM: 54.6
Samples: 6
Max nTPM: 71.3
Min nTPM: 24.9
P10809_1014
69.7
P10809_1026
51.6
P10809_1045
71.3
P10809_1064
56.8
P10809_1086
53.2
P10809_1113
24.9
Memory CD8 T-cell nTPM: 51.7
Samples: 5
Max nTPM: 61.1
Min nTPM: 36.9
P10809_1012
61.1
P10809_1027
36.9
P10809_1046
48.8
P10809_1065
54.4
P10809_1111
57.2
Naive CD4 T-cell nTPM: 63.5
Samples: 6
Max nTPM: 76.6
Min nTPM: 49.4
P10809_1015
65.2
P10809_1030
73.9
P10809_1049
49.4
P10809_1068
76.6
P10809_1085
60.6
P10809_1112
55.5
Naive CD8 T-cell nTPM: 42.2
Samples: 6
Max nTPM: 55.9
Min nTPM: 18.5
P10809_1016
55.9
P10809_1031
39.5
P10809_1050
45.6
P10809_1069
49.7
P10809_1087
18.5
P10809_1110
43.9
T-reg nTPM: 54.9
Samples: 6
Max nTPM: 83.1
Min nTPM: 27.5
P10809_1018
42.6
P10809_1037
83.1
P10809_1056
52.9
P10809_1075
58.3
P10809_1094
27.5
P10809_1106
64.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
235.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 205.9
Samples: 4
Max nTPM: 264.0
Min nTPM: 88.5
RHH5202_R3573
88.5
RHH5230_R3602
264.0
RHH5259_R3631
242.3
RHH5288_R3660
228.9
Effector memory CD8 T-cell nTPM: 152.6
Samples: 4
Max nTPM: 199.4
Min nTPM: 55.8
RHH5203_R3574
162.5
RHH5231_R3603
192.7
RHH5260_R3632
199.4
RHH5289_R3661
55.8
MAIT T-cell nTPM: 215.6
Samples: 4
Max nTPM: 263.1
Min nTPM: 161.3
RHH5233_R3605
161.3
RHH5205_R3576
263.1
RHH5262_R3634
256.8
RHH5297_R3663
181.3
Memory CD4 T-cell TFH nTPM: 196.6
Samples: 4
Max nTPM: 280.7
Min nTPM: 15.0
RHH5300_R3666
270.3
RHH5236_R3608
280.7
RHH5265_R3637
220.4
RHH5208_R3579
15.0
Memory CD4 T-cell Th1 nTPM: 208.2
Samples: 4
Max nTPM: 266.1
Min nTPM: 168.2
RHH5210_R3581
184.0
RHH5302_R3668
168.2
RHH5238_R3610
214.4
RHH5267_R3639
266.1
Memory CD4 T-cell Th1/Th17 nTPM: 211.0
Samples: 4
Max nTPM: 262.3
Min nTPM: 85.8
RHH5303_R3669
85.8
RHH5211_R3582
233.8
RHH5239_R3611
262.3
RHH5268_R3640
261.9
Memory CD4 T-cell Th17 nTPM: 199.2
Samples: 4
Max nTPM: 244.7
Min nTPM: 179.3
RHH5304_R3670
181.5
RHH5212_R3583
191.3
RHH5240_R3612
179.3
RHH5269_R3641
244.7
Memory CD4 T-cell Th2 nTPM: 223.9
Samples: 4
Max nTPM: 290.9
Min nTPM: 107.6
RHH5305_R3671
290.9
RHH5213_R3584
256.8
RHH5241_R3613
107.6
RHH5270_R3642
240.3
Naive CD4 T-cell nTPM: 216.1
Samples: 4
Max nTPM: 240.3
Min nTPM: 189.1
RHH5306_R3672
240.3
RHH5214_R3585
189.1
RHH5242_R3614
200.8
RHH5271_R3643
234.1
Naive CD8 T-cell nTPM: 156.5
Samples: 4
Max nTPM: 214.1
Min nTPM: 21.3
RHH5201_R3572
21.3
RHH5229_R3601
214.1
RHH5258_R3630
199.7
RHH5287_R3659
190.8
Non-Vd2 gdTCR nTPM: 160.1
Samples: 4
Max nTPM: 215.2
Min nTPM: 101.9
RHH5235_R3607
215.2
RHH5264_R3636
131.7
RHH5207_R3578
101.9
RHH5299_R3665
191.7
T-reg nTPM: 235.5
Samples: 4
Max nTPM: 271.1
Min nTPM: 219.3
RHH5301_R3667
219.3
RHH5237_R3609
271.1
RHH5266_R3638
226.0
RHH5209_R3580
225.5
Terminal effector memory CD4 T-cell nTPM: 153.3
Samples: 2
Max nTPM: 176.5
Min nTPM: 130.0
RHH5243_R3615
176.5
RHH5272_R3644
130.0
Terminal effector memory CD8 T-cell nTPM: 155.1
Samples: 4
Max nTPM: 213.6
Min nTPM: 91.0
RHH5232_R3604
168.4
RHH5204_R3575
147.3
RHH5261_R3633
213.6
RHH5296_R3662
91.0
Vd2 gdTCR nTPM: 230.4
Samples: 4
Max nTPM: 278.7
Min nTPM: 169.8
RHH5234_R3606
236.0
RHH5206_R3577
169.8
RHH5263_R3635
278.7
RHH5298_R3664
237.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
