HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:116.9 nTPM
HPA Brain:196.4 nTPM
GTEx:116.9 nTPM
FANTOM5:176.8 Scaled Tags Per Million
Pig:139.7 nTPM
Mouse:97.8 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015484
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 196.4
Sample id Sample description nTPM
Hippocampus
nTPM: 157.4
1898 Male, age 80, left hemisphere 233.5
1855 Male, age 76, left hemisphere 174.2
2621 Female, age 67, right hemisphere 158.4
2148 Female, age 91, left hemisphere 152.1
1911 Female, age 85, right hemisphere 121.3
2529 Female, age 94, left hemisphere 105.1
Dentate gyrus
nTPM: 179.9
1927 Female, age 91, both hemispheres 250.3
2010 Male, age 76, both hemispheres 204.0
2530 Female, age 94, left hemisphere 186.7
2528 Male, age 74, both hemispheres 167.9
2246 Female, age 85, both hemispheres 147.8
2531 Female, age 67, both hemispheres 122.8
Entorhinal gyrus
nTPM: 153.0
2764 Male, age 80, right hemisphere 197.9
1938 Female, age 85, left hemisphere 178.9
2613 Female, age 94, left hemisphere 177.2
1787 Male, age 76, left hemisphere 157.5
2117 Female, age 91, right hemisphere 122.6
2686 Male, age 75, right hemisphere 83.9
Hippocampus, CA1
nTPM: 196.4
2749 Male, age 80, left hemisphere 308.9
1873 Female, age 85, both hemispheres 199.8
2045 Male, age 76, both hemispheres 171.1
2527 Male, age 74, both hemispheres 161.2
2082 Female, age 91, right hemisphere 141.0
Hippocampus, CA2
nTPM: 181.6
1963 Male, age 80, left hemisphere 263.4
1892 Male, age 76, both hemispheres 242.5
2249 Male, age 74, both hemispheres 181.0
2437 Female, age 94, left hemisphere 148.6
2113 Female, age 91, right hemisphere 128.9
1940 Female, age 85, left hemisphere 125.0
Hippocampus, CA3
nTPM: 161.0
2137 Male, age 80, left hemisphere 190.7
2620 Female, age 94, left hemisphere 187.0
1867 Male, age 76, both hemispheres 170.4
2436 Male, age 74, both hemispheres 165.2
1891 Female, age 85, both hemispheres 135.1
2861 Female, age 67, both hemispheres 117.6
Parahippocampal cortex
nTPM: 142.8
1990 Female, age 91, right hemisphere 180.8
2250 Female, age 67, right hemisphere 180.2
1850 Male, age 80, both hemispheres 177.4
1933 Female, age 85, both hemispheres 162.4
2245 Female, age 91, both hemispheres 146.2
2693 Female, age 94, both hemispheres 135.9
2018 Male, age 76, both hemispheres 126.7
2532 Female, age 72, left hemisphere 115.7
2622 Female, age 67, right hemisphere 108.5
2692 Male, age 74, both hemispheres 93.8
Perirhinal gyrus
nTPM: 191.6
1847 Female, age 91, left hemisphere 252.1
1794 Male, age 80, right hemisphere 206.3
1841 Female, age 85, right hemisphere 172.1
2521 Female, age 94, right hemisphere 169.5
2848 Male, age 76, right hemisphere 158.1
Subiculum
nTPM: 127.5
1977 Female, age 85, both hemispheres 174.9
1901 Male, age 80, both hemispheres 142.0
2729 Female, age 91, right hemisphere 122.0
2619 Male, age 74, both hemispheres 118.0
2438 Female, age 94, left hemisphere 107.4
2042 Male, age 76, both hemispheres 100.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 116.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 116.9
Samples: 197

Max nTPM: 371.5
Min nTPM: 14.4
Std nTPM: 67.2
Median nTPM: 106.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 371.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 300.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 298.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 297.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 291.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 284.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 271.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 263.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 262.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 243.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 240.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 176.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 176.8
FF:10169-103B7 60 years, female 250.2
FF:10153-102I9 76 years, female 103.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 139.7
Pig sample Sample description nTPM
Subiculum
nTPM: 124.8
Samples: 4

Max nTPM: 154.8
Min nTPM: 102.4
Sample A Female 154.8
Sample B Female 110.4
Sample C Male 131.6
Sample D Male 102.4
Dorsal hippocampus
nTPM: 131.3
Samples: 4

Max nTPM: 157.2
Min nTPM: 105.9
Sample A Female 157.2
Sample B Female 150.5
Sample C Male 111.4
Sample D Male 105.9
Entorhinal cortex
nTPM: 121.4
Samples: 4

Max nTPM: 137.1
Min nTPM: 106.6
Sample A Female 137.1
Sample B Female 118.9
Sample C Male 123.0
Sample D Male 106.6
Ventral hippocampus
nTPM: 139.6
Samples: 4

Max nTPM: 185.0
Min nTPM: 90.6
Sample A Female 139.0
Sample B Female 90.6
Sample C Male 185.0
Sample D Male 143.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.5
Samples: 4

Max nTPM: 95.2
Min nTPM: 85.6
Sample A Male 89.5
Sample B Male 95.2
Sample C Female 85.6
Sample D Female 87.5
Hippocampal formation
nTPM: 97.8
Samples: 4

Max nTPM: 105.9
Min nTPM: 93.2
Sample A Male 95.1
Sample B Male 96.8
Sample C Female 105.9
Sample D Female 93.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
77332102 Antisense, RP_070116_02_B02, Mouse strain C57BL/6J (56 days, male) 13.7
69527932 Antisense, RP_050421_02_G04, Mouse strain C57BL/6J (56 days, male) 11.1

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