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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.3
nTPM
Monaco:
573.7
nTPM
Schmiedel:
388.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.3
HPA sample
nTPM
gdT-cell nTPM: 42.4
Samples: 6
Max nTPM: 69.0
Min nTPM: 23.3
P10809_1007
33.1
P10809_1022
45.7
P10809_1041
40.4
P10809_1060
69.0
P10809_1077
42.8
P10809_1098
23.3
MAIT T-cell nTPM: 40.4
Samples: 6
Max nTPM: 65.4
Min nTPM: 17.5
P10809_1006
37.6
P10809_1024
44.2
P10809_1043
38.1
P10809_1062
65.4
P10809_1083
39.5
P10809_1097
17.5
Memory CD4 T-cell nTPM: 38.2
Samples: 6
Max nTPM: 56.2
Min nTPM: 25.3
P10809_1014
30.9
P10809_1026
25.3
P10809_1045
38.1
P10809_1064
56.2
P10809_1086
47.1
P10809_1113
31.3
Memory CD8 T-cell nTPM: 40.7
Samples: 5
Max nTPM: 59.4
Min nTPM: 26.7
P10809_1012
38.1
P10809_1027
34.9
P10809_1046
44.4
P10809_1065
59.4
P10809_1111
26.7
Naive CD4 T-cell nTPM: 44.3
Samples: 6
Max nTPM: 67.5
Min nTPM: 31.2
P10809_1015
47.1
P10809_1030
32.8
P10809_1049
31.2
P10809_1068
67.5
P10809_1085
52.9
P10809_1112
34.2
Naive CD8 T-cell nTPM: 44.0
Samples: 6
Max nTPM: 64.2
Min nTPM: 30.9
P10809_1016
53.4
P10809_1031
34.5
P10809_1050
40.2
P10809_1069
64.2
P10809_1087
40.7
P10809_1110
30.9
T-reg nTPM: 39.1
Samples: 6
Max nTPM: 48.3
Min nTPM: 32.8
P10809_1018
34.0
P10809_1037
44.8
P10809_1056
40.1
P10809_1075
48.3
P10809_1094
32.8
P10809_1106
34.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
573.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 573.7
Samples: 4
Max nTPM: 652.5
Min nTPM: 508.5
RHH5202_R3573
565.2
RHH5230_R3602
508.5
RHH5259_R3631
568.7
RHH5288_R3660
652.5
Effector memory CD8 T-cell nTPM: 368.2
Samples: 4
Max nTPM: 539.3
Min nTPM: 220.1
RHH5203_R3574
453.4
RHH5231_R3603
220.1
RHH5260_R3632
259.9
RHH5289_R3661
539.3
MAIT T-cell nTPM: 436.7
Samples: 4
Max nTPM: 538.1
Min nTPM: 290.6
RHH5233_R3605
538.1
RHH5205_R3576
513.1
RHH5262_R3634
404.8
RHH5297_R3663
290.6
Memory CD4 T-cell TFH nTPM: 514.7
Samples: 4
Max nTPM: 648.5
Min nTPM: 314.5
RHH5300_R3666
523.5
RHH5236_R3608
314.5
RHH5265_R3637
572.4
RHH5208_R3579
648.5
Memory CD4 T-cell Th1 nTPM: 462.4
Samples: 4
Max nTPM: 538.3
Min nTPM: 386.9
RHH5210_R3581
467.5
RHH5302_R3668
386.9
RHH5238_R3610
538.3
RHH5267_R3639
456.9
Memory CD4 T-cell Th1/Th17 nTPM: 426.2
Samples: 4
Max nTPM: 586.0
Min nTPM: 250.2
RHH5303_R3669
379.8
RHH5211_R3582
250.2
RHH5239_R3611
586.0
RHH5268_R3640
488.7
Memory CD4 T-cell Th17 nTPM: 396.1
Samples: 4
Max nTPM: 603.7
Min nTPM: 238.5
RHH5304_R3670
450.9
RHH5212_R3583
238.5
RHH5240_R3612
291.2
RHH5269_R3641
603.7
Memory CD4 T-cell Th2 nTPM: 401.0
Samples: 4
Max nTPM: 496.6
Min nTPM: 307.0
RHH5305_R3671
327.4
RHH5213_R3584
307.0
RHH5241_R3613
496.6
RHH5270_R3642
473.1
Naive CD4 T-cell nTPM: 411.3
Samples: 4
Max nTPM: 519.2
Min nTPM: 215.3
RHH5306_R3672
467.8
RHH5214_R3585
215.3
RHH5242_R3614
519.2
RHH5271_R3643
442.8
Naive CD8 T-cell nTPM: 408.0
Samples: 4
Max nTPM: 492.8
Min nTPM: 268.6
RHH5201_R3572
492.8
RHH5229_R3601
268.6
RHH5258_R3630
383.2
RHH5287_R3659
487.5
Non-Vd2 gdTCR nTPM: 344.1
Samples: 4
Max nTPM: 525.3
Min nTPM: 130.7
RHH5235_R3607
436.9
RHH5264_R3636
130.7
RHH5207_R3578
525.3
RHH5299_R3665
283.5
T-reg nTPM: 407.2
Samples: 4
Max nTPM: 448.8
Min nTPM: 344.0
RHH5301_R3667
418.1
RHH5237_R3609
344.0
RHH5266_R3638
448.8
RHH5209_R3580
417.7
Terminal effector memory CD4 T-cell nTPM: 520.7
Samples: 2
Max nTPM: 532.0
Min nTPM: 509.4
RHH5243_R3615
532.0
RHH5272_R3644
509.4
Terminal effector memory CD8 T-cell nTPM: 363.9
Samples: 4
Max nTPM: 504.8
Min nTPM: 175.6
RHH5232_R3604
504.8
RHH5204_R3575
331.0
RHH5261_R3633
175.6
RHH5296_R3662
444.0
Vd2 gdTCR nTPM: 322.6
Samples: 4
Max nTPM: 471.4
Min nTPM: 190.4
RHH5234_R3606
471.4
RHH5206_R3577
204.1
RHH5263_R3635
190.4
RHH5298_R3664
424.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
