HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:22.3 nTPM
HPA Brain:16.4 nTPM
GTEx:22.3 nTPM
FANTOM5:27.0 Scaled Tags Per Million
Pig:13.6 nTPM
Mouse:22.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB010824
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.4
Sample id Sample description nTPM
Hippocampus
nTPM: 14.2
1911 Female, age 85, right hemisphere 15.9
2621 Female, age 67, right hemisphere 15.9
1898 Male, age 80, left hemisphere 14.6
2148 Female, age 91, left hemisphere 14.0
1855 Male, age 76, left hemisphere 13.4
2529 Female, age 94, left hemisphere 11.4
Dentate gyrus
nTPM: 13.3
2010 Male, age 76, both hemispheres 15.7
1927 Female, age 91, both hemispheres 14.1
2530 Female, age 94, left hemisphere 13.7
2246 Female, age 85, both hemispheres 12.5
2531 Female, age 67, both hemispheres 12.1
2528 Male, age 74, both hemispheres 11.8
Entorhinal gyrus
nTPM: 12.4
2764 Male, age 80, right hemisphere 13.4
2117 Female, age 91, right hemisphere 13.1
1938 Female, age 85, left hemisphere 12.8
2686 Male, age 75, right hemisphere 12.2
1787 Male, age 76, left hemisphere 12.1
2613 Female, age 94, left hemisphere 11.1
Hippocampus, CA1
nTPM: 16.4
2749 Male, age 80, left hemisphere 30.0
2045 Male, age 76, both hemispheres 13.3
2082 Female, age 91, right hemisphere 13.2
2527 Male, age 74, both hemispheres 13.0
1873 Female, age 85, both hemispheres 12.6
Hippocampus, CA2
nTPM: 14.0
1963 Male, age 80, left hemisphere 16.8
1892 Male, age 76, both hemispheres 14.4
1940 Female, age 85, left hemisphere 13.8
2249 Male, age 74, both hemispheres 13.6
2113 Female, age 91, right hemisphere 12.9
2437 Female, age 94, left hemisphere 12.7
Hippocampus, CA3
nTPM: 16.4
2137 Male, age 80, left hemisphere 25.7
1867 Male, age 76, both hemispheres 16.4
2861 Female, age 67, both hemispheres 15.7
2620 Female, age 94, left hemisphere 14.5
2436 Male, age 74, both hemispheres 14.0
1891 Female, age 85, both hemispheres 12.0
Parahippocampal cortex
nTPM: 12.0
2245 Female, age 91, both hemispheres 14.9
2692 Male, age 74, both hemispheres 13.9
2532 Female, age 72, left hemisphere 12.9
1933 Female, age 85, both hemispheres 12.4
1990 Female, age 91, right hemisphere 11.8
2250 Female, age 67, right hemisphere 11.6
2622 Female, age 67, right hemisphere 11.5
2018 Male, age 76, both hemispheres 11.3
1850 Male, age 80, both hemispheres 10.5
2693 Female, age 94, both hemispheres 9.2
Perirhinal gyrus
nTPM: 11.0
1794 Male, age 80, right hemisphere 12.7
2521 Female, age 94, right hemisphere 12.3
1847 Female, age 91, left hemisphere 10.7
1841 Female, age 85, right hemisphere 10.1
2848 Male, age 76, right hemisphere 9.3
Subiculum
nTPM: 13.9
2042 Male, age 76, both hemispheres 18.8
1901 Male, age 80, both hemispheres 17.0
2729 Female, age 91, right hemisphere 13.3
1977 Female, age 85, both hemispheres 12.4
2619 Male, age 74, both hemispheres 12.3
2438 Female, age 94, left hemisphere 9.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.3
Samples: 197

Max nTPM: 59.6
Min nTPM: 12.3
Std nTPM: 6.4
Median nTPM: 20.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 59.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 46.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 45.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 42.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 38.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 36.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 34.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 34.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 33.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 33.4
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 33.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.0
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.6
Pig sample Sample description nTPM
Subiculum
nTPM: 12.3
Samples: 4

Max nTPM: 13.5
Min nTPM: 11.3
Sample A Female 13.5
Sample B Female 11.3
Sample C Male 12.5
Sample D Male 12.0
Dorsal hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 17.9
Min nTPM: 8.9
Sample A Female 17.9
Sample B Female 11.7
Sample C Male 13.7
Sample D Male 8.9
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 12.0
Min nTPM: 9.5
Sample A Female 9.9
Sample B Female 12.0
Sample C Male 10.0
Sample D Male 9.5
Ventral hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 15.8
Min nTPM: 9.6
Sample A Female 14.5
Sample B Female 9.6
Sample C Male 15.8
Sample D Male 14.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 23.1
Min nTPM: 20.6
Sample A Male 20.6
Sample B Male 22.9
Sample C Female 23.1
Sample D Female 21.7
Hippocampal formation
nTPM: 21.4
Samples: 4

Max nTPM: 23.1
Min nTPM: 19.4
Sample A Male 23.1
Sample B Male 19.4
Sample C Female 21.3
Sample D Female 21.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71763741 Antisense, RP_050921_02_E11, Mouse strain C57BL/6J (56 days, male) 0.3

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