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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
691.9
nTPM
FANTOM5:
129.5
Scaled Tags Per Million
Pig:
327.6
nTPM
Allen mouse:
6.8
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
691.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 622.7
2090
Male, age 80, both hemispheres
647.8
2188
Female, age 91, both hemispheres
637.9
2301
Female, age 85, both hemispheres
636.0
1984
Male, age 76, both hemispheres
569.2
Dorsal cochlear nucleus nTPM: 691.9
2802
Male, age 74, right hemisphere
827.4
2378
Male, age 80, both hemispheres
711.7
2370
Male, age 61, both hemispheres
662.2
2187
Female, age 91, both hemispheres
657.0
2058
Male, age 76, both hemispheres
601.4
Dorsal tegmental nucleus nTPM: 641.7
2326
Male, age 74, both hemispheres
732.5
2083
Male, age 80, both hemispheres
650.3
2358
Male, age 61, both hemispheres
611.8
1936
Male, age 76, left hemisphere
572.3
Dorsolateral tegmental area nTPM: 640.4
2654
Male, age 80, both hemispheres
736.8
2337
Male, age 61, both hemispheres
654.0
2751
Female, age 85, both hemispheres
639.8
2360
Male, age 74, both hemispheres
623.5
2141
Male, age 76, both hemispheres
547.8
Kolliker-Fuse nucleus nTPM: 626.4
2315
Male, age 76, right hemisphere
723.1
2163
Male, age 80, both hemispheres
578.3
2793
Female, age 91, left hemisphere
577.7
Lateral lemniscal nuclei nTPM: 581.8
2169
Male, age 76, both hemispheres
651.5
2746
Female, age 85, left hemisphere
617.6
2036
Male, age 80, both hemispheres
556.6
2320
Female, age 91, left hemisphere
542.7
2453
Male, age 74, right hemisphere
540.4
Lateral parabrachial nucleus nTPM: 651.9
2013
Male, age 80, both hemispheres
733.5
2792
Male, age 76, both hemispheres
664.3
2139
Female, age 85, right hemisphere
645.6
2790
Male, age 61, both hemispheres
564.4
Lateral vestibular nucleus nTPM: 593.1
2311
Male, age 80, both hemispheres
681.2
2184
Male, age 76, both hemispheres
505.0
Locus coeruleus nTPM: 620.4
2014
Male, age 55, unknown
698.9
2123
Female, age 91, both hemispheres
651.2
2317
Female, age 72, unknown
651.2
2162
Male, age 80, both hemispheres
635.7
2720
Male, age 74, both hemispheres
633.3
1980
Male, age 76, both hemispheres
554.7
2788
Male, age 74, unknown
518.0
Medial parabrachial nucleus nTPM: 621.1
2170
Female, age 91, both hemispheres
760.0
2463
Female, age 85, right hemisphere
638.6
2854
Male, age 80, both hemispheres
599.6
2786
Male, age 76, both hemispheres
563.2
2156
Male, age 61, both hemispheres
544.1
Medial periolivary nuclei nTPM: 600.9
2063
Male, age 76, both hemispheres
767.2
2171
Female, age 85, both hemispheres
579.9
2081
Male, age 80, both hemispheres
569.8
2791
Male, age 74, right hemisphere
552.2
2458
Female, age 91, both hemispheres
535.5
Motor facial nucleus nTPM: 596.7
2062
Male, age 76, both hemispheres
732.7
2795
Female, age 91, both hemispheres
683.7
2365
Male, age 74, right hemisphere
619.8
2126
Male, age 61, both hemispheres
555.0
2697
Female, age 85, both hemispheres
504.1
2327
Male, age 80, both hemispheres
484.8
Motor trigeminal nucleus nTPM: 560.6
2560
Male, age 74, both hemispheres
643.4
2321
Female, age 91, both hemispheres
582.4
2309
Male, age 76, both hemispheres
553.1
2335
Male, age 61, both hemispheres
536.3
2079
Male, age 80, both hemispheres
487.9
Nuclei of the trapezoid body nTPM: 627.9
1983
Male, age 76, both hemispheres
761.8
2735
Female, age 85, both hemispheres
622.4
2368
Female, age 91, both hemispheres
615.8
2166
Male, age 80, both hemispheres
578.7
2159
Male, age 61, both hemispheres
560.9
Nucleus raphe magnus nTPM: 596.0
2051
Male, age 76, both hemispheres
671.0
2172
Female, age 85, both hemispheres
601.3
2160
Male, age 61, both hemispheres
601.1
2455
Male, age 74, both hemispheres
587.4
2459
Female, age 91, both hemispheres
563.2
2328
Male, age 80, both hemispheres
551.9
Paramedian reticular nucleus nTPM: 602.5
2050
Female, age 85, both hemispheres
628.4
2057
Male, age 80, both hemispheres
624.3
2313
Male, age 61, both hemispheres
580.8
2052
Male, age 76, both hemispheres
576.3
Pedunculopontine tegmental nucleus nTPM: 593.2
2334
Male, age 80, both hemispheres
650.0
2338
Male, age 61, both hemispheres
568.6
1921
Female, age 85, both hemispheres
561.2
Pontine nuclei nTPM: 650.1
1863
Male, age 55, unknown
758.3
2787
Female, age 85, both hemispheres
730.1
1968
Male, age 76, left hemisphere
712.3
2319
Female, age 91, both hemispheres
651.1
2109
Female, age 72, unknown
629.5
2727
Male, age 61, right hemisphere
588.3
2454
Male, age 74, left hemisphere
582.3
2115
Male, age 80, left hemisphere
548.6
Pontine raphe nucleus nTPM: 584.1
2122
Female, age 85, midline
599.0
2853
Male, age 76, midline
569.1
Posteroventral cochlear nucleus nTPM: 634.9
2371
Male, age 61, both hemispheres
716.3
2752
Female, age 85, both hemispheres
646.6
2341
Male, age 80, both hemispheres
631.2
2070
Male, age 76, both hemispheres
590.7
2135
Female, age 91, both hemispheres
589.6
Principal sensory trigeminal nucleus nTPM: 546.5
2158
Male, age 61, both hemispheres
587.9
2367
Female, age 91, left hemisphere
552.1
2008
Male, age 80, left hemisphere
523.7
2324
Male, age 76, both hemispheres
522.0
Reticular pontine nucleus, caudal nTPM: 587.0
2092
Male, age 76, both hemispheres
665.4
2559
Male, age 74, both hemispheres
626.9
2457
Female, age 91, both hemispheres
581.8
2332
Male, age 80, right hemisphere
473.7
Reticular pontine nucleus, oral nTPM: 602.6
2366
Female, age 91, both hemispheres
620.8
2012
Female, age 85, both hemispheres
610.2
2167
Male, age 76, both hemispheres
605.2
1939
Male, age 80, both hemispheres
602.1
2361
Male, age 74, both hemispheres
574.8
Reticulotegmental nucleus nTPM: 602.7
2452
Male, age 74, both hemispheres
698.1
2322
Female, age 91, both hemispheres
576.5
2333
Male, age 80, both hemispheres
572.5
2325
Male, age 76, both hemispheres
563.8
Spinal trigeminal nucleus, oral nTPM: 565.6
1978
Male, age 76, both hemispheres
586.8
2164
Male, age 80, both hemispheres
580.5
2737
Female, age 85, both hemispheres
529.6
Subcoeruleus area nTPM: 632.5
2451
Male, age 74, both hemispheres
781.9
2369
Female, age 85, left hemisphere
668.7
2323
Female, age 91, left hemisphere
600.8
1958
Male, age 80, both hemispheres
592.7
2089
Male, age 76, left hemisphere
518.5
Superior olive nTPM: 604.1
2020
Male, age 76, both hemispheres
673.4
2364
Male, age 74, right hemisphere
638.3
1875
Female, age 85, both hemispheres
600.0
2561
Female, age 91, both hemispheres
598.9
2329
Male, age 80, right hemisphere
509.8
Ventral periolivary nuclei nTPM: 613.8
2023
Male, age 76, both hemispheres
707.5
2130
Female, age 85, both hemispheres
604.6
2165
Male, age 80, both hemispheres
597.6
2794
Female, age 91, left hemisphere
545.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 585.3
2161
Male, age 80, both hemispheres
642.0
2456
Female, age 91, both hemispheres
603.9
2359
Male, age 61, both hemispheres
592.6
1959
Male, age 76, both hemispheres
585.1
2840
Female, age 85, both hemispheres
547.9
2449
Male, age 74, both hemispheres
540.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
327.6
Pig sample
Sample description
nTPM
Pons nTPM: 327.6
Samples: 4
Max nTPM: 391.7
Min nTPM: 244.4
Sample A
Female
391.7
Sample B
Female
244.4
Sample C
Male
330.5
Sample D
Male
343.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
