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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
12.4
nTPM
HPA Brain:
39.7
nTPM
GTEx:
12.4
nTPM
FANTOM5:
57.8
Scaled Tags Per Million
Pig:
50.6
nTPM
Mouse:
51.6
nTPM
AMYGDALA - HPA Brain RNA-seq
Max nTPM
39.7
Sample id
Sample description
nTPM
Amygdala nTPM: 39.7
2814
Male, age 76, right hemisphere
43.3
2514
Male, age 75, right hemisphere
42.0
1987
Female, age 91, left hemisphere
40.1
2695
Female, age 67, right hemisphere
37.5
2517
Female, age 94, left hemisphere
35.6
Basal amygdala nTPM: 32.3
2609
Male, age 75, right hemisphere
36.3
1955
Male, age 76, both hemispheres
34.3
2110
Male, age 80, left hemisphere
32.7
2685
Female, age 94, left hemisphere
31.8
2243
Female, age 91, right hemisphere
29.9
2827
Female, age 67, right hemisphere
28.9
Central amygdala nTPM: 35.2
1905
Male, age 76, both hemispheres
38.9
2239
Male, age 80, left hemisphere
37.3
2515
Male, age 75, right hemisphere
35.3
2701
Female, age 91, right hemisphere
34.8
2826
Female, age 94, left hemisphere
30.0
Corticomedial amygdala nTPM: 35.8
2428
Male, age 75, right hemisphere
42.0
2429
Female, age 94, left hemisphere
41.0
2240
Male, age 76, both hemispheres
37.3
2829
Male, age 80, left hemisphere
35.1
2242
Female, age 91, right hemisphere
31.8
2535
Female, age 67, right hemisphere
27.6
Lateral amygdala nTPM: 34.0
2516
Male, age 75, right hemisphere
39.5
1883
Male, age 76, both hemispheres
38.8
2255
Female, age 91, right hemisphere
33.7
2256
Male, age 80, left hemisphere
31.0
2830
Female, age 67, right hemisphere
30.5
2534
Female, age 94, left hemisphere
30.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
12.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 12.4
Samples: 152
Max nTPM: 24.7
Min nTPM: 5.6
Std nTPM: 3.5
Median nTPM: 12.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
24.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
22.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
21.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
20.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
20.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
20.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
19.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
19.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
19.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
18.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
18.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
18.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
18.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
18.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
18.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
17.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
17.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
17.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
17.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
17.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
16.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
16.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
16.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
15.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
15.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
15.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
15.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
15.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
15.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
14.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
14.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
14.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
14.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
14.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
14.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
14.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
14.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
14.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
14.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
14.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
14.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
14.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
14.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
13.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
13.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
13.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
13.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
13.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
13.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
13.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
13.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
13.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
13.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
13.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
13.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
13.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
12.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
12.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
12.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
12.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
12.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
12.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
12.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
12.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
12.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
12.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
12.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
12.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
12.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
12.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
12.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
12.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
12.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
12.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
12.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
12.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
12.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
11.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
11.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
11.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
11.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
11.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
11.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
11.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
11.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
11.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
11.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
11.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
11.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
11.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
11.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
11.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
11.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
11.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
11.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
10.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
10.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
10.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
10.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
10.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
10.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
10.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
10.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
10.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
10.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
10.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
10.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
10.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
10.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
10.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
10.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
9.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
9.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
9.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
9.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
9.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
9.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
9.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
9.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
9.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
9.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
9.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
9.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
9.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
9.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
9.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
9.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
9.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
9.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
9.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
9.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
9.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
9.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
8.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
8.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
8.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
8.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
8.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
8.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
8.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
8.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
7.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
7.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
7.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
7.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
7.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
7.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
7.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
7.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
6.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
6.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
5.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
