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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
228.0
nTPM
Monaco:
249.1
nTPM
Schmiedel:
89.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
228.0
HPA sample
nTPM
gdT-cell nTPM: 228.0
Samples: 6
Max nTPM: 268.3
Min nTPM: 196.7
P10809_1007
196.7
P10809_1022
268.3
P10809_1041
228.0
P10809_1060
204.6
P10809_1077
244.6
P10809_1098
225.6
MAIT T-cell nTPM: 172.1
Samples: 6
Max nTPM: 220.5
Min nTPM: 144.5
P10809_1006
156.8
P10809_1024
161.4
P10809_1043
183.4
P10809_1062
166.1
P10809_1083
220.5
P10809_1097
144.5
Memory CD4 T-cell nTPM: 135.9
Samples: 6
Max nTPM: 159.4
Min nTPM: 118.0
P10809_1014
121.1
P10809_1026
133.1
P10809_1045
118.0
P10809_1064
159.4
P10809_1086
155.2
P10809_1113
128.7
Memory CD8 T-cell nTPM: 188.1
Samples: 5
Max nTPM: 223.3
Min nTPM: 141.9
P10809_1012
174.7
P10809_1027
223.3
P10809_1046
207.0
P10809_1065
193.5
P10809_1111
141.9
Naive CD4 T-cell nTPM: 115.6
Samples: 6
Max nTPM: 157.7
Min nTPM: 99.9
P10809_1015
100.7
P10809_1030
100.1
P10809_1049
99.9
P10809_1068
115.9
P10809_1085
157.7
P10809_1112
119.3
Naive CD8 T-cell nTPM: 141.1
Samples: 6
Max nTPM: 176.6
Min nTPM: 112.0
P10809_1016
132.9
P10809_1031
137.6
P10809_1050
123.4
P10809_1069
176.6
P10809_1087
163.9
P10809_1110
112.0
T-reg nTPM: 166.0
Samples: 6
Max nTPM: 206.5
Min nTPM: 130.1
P10809_1018
156.0
P10809_1037
130.1
P10809_1056
206.5
P10809_1075
173.1
P10809_1094
186.9
P10809_1106
143.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
249.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 122.7
Samples: 4
Max nTPM: 137.2
Min nTPM: 96.2
RHH5202_R3573
137.2
RHH5230_R3602
120.2
RHH5259_R3631
96.2
RHH5288_R3660
137.2
Effector memory CD8 T-cell nTPM: 249.1
Samples: 4
Max nTPM: 285.6
Min nTPM: 197.6
RHH5203_R3574
197.6
RHH5231_R3603
276.2
RHH5260_R3632
285.6
RHH5289_R3661
236.8
MAIT T-cell nTPM: 141.1
Samples: 4
Max nTPM: 156.1
Min nTPM: 130.7
RHH5233_R3605
130.7
RHH5205_R3576
140.9
RHH5262_R3634
136.7
RHH5297_R3663
156.1
Memory CD4 T-cell TFH nTPM: 132.9
Samples: 4
Max nTPM: 152.7
Min nTPM: 111.3
RHH5300_R3666
120.6
RHH5236_R3608
152.7
RHH5265_R3637
111.3
RHH5208_R3579
146.9
Memory CD4 T-cell Th1 nTPM: 114.6
Samples: 4
Max nTPM: 143.9
Min nTPM: 98.3
RHH5210_R3581
98.3
RHH5302_R3668
143.9
RHH5238_R3610
98.4
RHH5267_R3639
117.8
Memory CD4 T-cell Th1/Th17 nTPM: 141.7
Samples: 4
Max nTPM: 206.2
Min nTPM: 70.4
RHH5303_R3669
165.7
RHH5211_R3582
206.2
RHH5239_R3611
70.4
RHH5268_R3640
124.4
Memory CD4 T-cell Th17 nTPM: 174.4
Samples: 4
Max nTPM: 213.7
Min nTPM: 111.2
RHH5304_R3670
192.8
RHH5212_R3583
179.8
RHH5240_R3612
213.7
RHH5269_R3641
111.2
Memory CD4 T-cell Th2 nTPM: 145.3
Samples: 4
Max nTPM: 179.3
Min nTPM: 118.2
RHH5305_R3671
162.5
RHH5213_R3584
179.3
RHH5241_R3613
118.2
RHH5270_R3642
121.0
Naive CD4 T-cell nTPM: 95.0
Samples: 4
Max nTPM: 101.1
Min nTPM: 83.8
RHH5306_R3672
83.8
RHH5214_R3585
98.8
RHH5242_R3614
96.1
RHH5271_R3643
101.1
Naive CD8 T-cell nTPM: 100.7
Samples: 4
Max nTPM: 109.6
Min nTPM: 88.4
RHH5201_R3572
102.4
RHH5229_R3601
88.4
RHH5258_R3630
102.2
RHH5287_R3659
109.6
Non-Vd2 gdTCR nTPM: 232.4
Samples: 4
Max nTPM: 312.8
Min nTPM: 190.7
RHH5235_R3607
200.2
RHH5264_R3636
312.8
RHH5207_R3578
190.7
RHH5299_R3665
225.9
T-reg nTPM: 129.3
Samples: 4
Max nTPM: 175.2
Min nTPM: 100.8
RHH5301_R3667
128.0
RHH5237_R3609
175.2
RHH5266_R3638
100.8
RHH5209_R3580
113.1
Terminal effector memory CD4 T-cell nTPM: 182.2
Samples: 2
Max nTPM: 186.1
Min nTPM: 178.2
RHH5243_R3615
186.1
RHH5272_R3644
178.2
Terminal effector memory CD8 T-cell nTPM: 244.1
Samples: 4
Max nTPM: 312.7
Min nTPM: 194.1
RHH5232_R3604
204.5
RHH5204_R3575
194.1
RHH5261_R3633
312.7
RHH5296_R3662
265.1
Vd2 gdTCR nTPM: 224.0
Samples: 4
Max nTPM: 298.9
Min nTPM: 156.7
RHH5234_R3606
156.7
RHH5206_R3577
298.9
RHH5263_R3635
259.7
RHH5298_R3664
180.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
