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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
238.0
nTPM
Monaco:
46.6
nTPM
Schmiedel:
34.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
238.0
HPA sample
nTPM
gdT-cell nTPM: 199.5
Samples: 6
Max nTPM: 269.8
Min nTPM: 146.6
P10809_1007
146.6
P10809_1022
212.3
P10809_1041
269.8
P10809_1060
160.3
P10809_1077
206.8
P10809_1098
201.1
MAIT T-cell nTPM: 238.0
Samples: 6
Max nTPM: 310.8
Min nTPM: 134.8
P10809_1006
134.8
P10809_1024
265.6
P10809_1043
273.7
P10809_1062
262.2
P10809_1083
180.8
P10809_1097
310.8
Memory CD4 T-cell nTPM: 229.2
Samples: 6
Max nTPM: 275.6
Min nTPM: 154.1
P10809_1014
154.1
P10809_1026
275.6
P10809_1045
239.7
P10809_1064
242.5
P10809_1086
217.2
P10809_1113
245.8
Memory CD8 T-cell nTPM: 225.9
Samples: 5
Max nTPM: 287.5
Min nTPM: 137.6
P10809_1012
137.6
P10809_1027
241.5
P10809_1046
287.5
P10809_1065
235.0
P10809_1111
228.0
Naive CD4 T-cell nTPM: 223.5
Samples: 6
Max nTPM: 299.5
Min nTPM: 118.1
P10809_1015
118.1
P10809_1030
262.5
P10809_1049
299.5
P10809_1068
241.7
P10809_1085
209.4
P10809_1112
210.0
Naive CD8 T-cell nTPM: 211.9
Samples: 6
Max nTPM: 237.6
Min nTPM: 174.8
P10809_1016
174.8
P10809_1031
213.3
P10809_1050
222.1
P10809_1069
237.6
P10809_1087
203.1
P10809_1110
220.2
T-reg nTPM: 211.7
Samples: 6
Max nTPM: 294.1
Min nTPM: 142.9
P10809_1018
142.9
P10809_1037
231.7
P10809_1056
294.1
P10809_1075
167.2
P10809_1094
216.2
P10809_1106
218.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 26.7
Samples: 4
Max nTPM: 37.1
Min nTPM: 8.9
RHH5202_R3573
8.9
RHH5230_R3602
32.0
RHH5259_R3631
37.1
RHH5288_R3660
28.9
Effector memory CD8 T-cell nTPM: 22.5
Samples: 4
Max nTPM: 34.3
Min nTPM: 14.1
RHH5203_R3574
14.1
RHH5231_R3603
20.9
RHH5260_R3632
34.3
RHH5289_R3661
20.5
MAIT T-cell nTPM: 33.1
Samples: 4
Max nTPM: 39.7
Min nTPM: 27.0
RHH5233_R3605
33.9
RHH5205_R3576
39.7
RHH5262_R3634
31.7
RHH5297_R3663
27.0
Memory CD4 T-cell TFH nTPM: 24.3
Samples: 4
Max nTPM: 34.1
Min nTPM: 15.4
RHH5300_R3666
22.7
RHH5236_R3608
34.1
RHH5265_R3637
15.4
RHH5208_R3579
25.0
Memory CD4 T-cell Th1 nTPM: 39.0
Samples: 4
Max nTPM: 65.8
Min nTPM: 19.6
RHH5210_R3581
19.6
RHH5302_R3668
29.7
RHH5238_R3610
65.8
RHH5267_R3639
41.0
Memory CD4 T-cell Th1/Th17 nTPM: 38.2
Samples: 4
Max nTPM: 50.8
Min nTPM: 19.6
RHH5303_R3669
43.8
RHH5211_R3582
19.6
RHH5239_R3611
38.7
RHH5268_R3640
50.8
Memory CD4 T-cell Th17 nTPM: 30.0
Samples: 4
Max nTPM: 37.6
Min nTPM: 26.5
RHH5304_R3670
37.6
RHH5212_R3583
28.1
RHH5240_R3612
27.9
RHH5269_R3641
26.5
Memory CD4 T-cell Th2 nTPM: 29.8
Samples: 4
Max nTPM: 40.9
Min nTPM: 15.6
RHH5305_R3671
40.9
RHH5213_R3584
32.4
RHH5241_R3613
15.6
RHH5270_R3642
30.1
Naive CD4 T-cell nTPM: 26.7
Samples: 4
Max nTPM: 32.3
Min nTPM: 17.4
RHH5306_R3672
32.3
RHH5214_R3585
27.5
RHH5242_R3614
17.4
RHH5271_R3643
29.7
Naive CD8 T-cell nTPM: 26.5
Samples: 4
Max nTPM: 31.3
Min nTPM: 19.9
RHH5201_R3572
19.9
RHH5229_R3601
31.3
RHH5258_R3630
25.7
RHH5287_R3659
28.9
Non-Vd2 gdTCR nTPM: 32.1
Samples: 4
Max nTPM: 44.5
Min nTPM: 21.8
RHH5235_R3607
28.9
RHH5264_R3636
44.5
RHH5207_R3578
21.8
RHH5299_R3665
33.0
T-reg nTPM: 27.7
Samples: 4
Max nTPM: 33.4
Min nTPM: 17.2
RHH5301_R3667
33.4
RHH5237_R3609
17.2
RHH5266_R3638
32.1
RHH5209_R3580
28.1
Terminal effector memory CD4 T-cell nTPM: 28.3
Samples: 2
Max nTPM: 40.2
Min nTPM: 16.4
RHH5243_R3615
40.2
RHH5272_R3644
16.4
Terminal effector memory CD8 T-cell nTPM: 30.8
Samples: 4
Max nTPM: 38.3
Min nTPM: 20.4
RHH5232_R3604
20.4
RHH5204_R3575
33.3
RHH5261_R3633
38.3
RHH5296_R3662
31.0
Vd2 gdTCR nTPM: 46.7
Samples: 4
Max nTPM: 82.2
Min nTPM: 23.3
RHH5234_R3606
28.9
RHH5206_R3577
82.2
RHH5263_R3635
52.2
RHH5298_R3664
23.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
