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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
110.6
nTPM
Monaco:
529.4
nTPM
Schmiedel:
622.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
110.6
HPA sample
nTPM
gdT-cell nTPM: 28.1
Samples: 6
Max nTPM: 41.5
Min nTPM: 19.4
P10809_1007
33.6
P10809_1022
24.2
P10809_1041
24.7
P10809_1060
41.5
P10809_1077
24.9
P10809_1098
19.4
MAIT T-cell nTPM: 110.6
Samples: 6
Max nTPM: 150.9
Min nTPM: 89.3
P10809_1006
150.9
P10809_1024
106.5
P10809_1043
96.7
P10809_1062
112.0
P10809_1083
89.3
P10809_1097
108.2
Memory CD4 T-cell nTPM: 40.3
Samples: 6
Max nTPM: 56.8
Min nTPM: 32.0
P10809_1014
56.8
P10809_1026
37.0
P10809_1045
41.3
P10809_1064
32.0
P10809_1086
37.6
P10809_1113
37.3
Memory CD8 T-cell nTPM: 53.5
Samples: 5
Max nTPM: 82.8
Min nTPM: 37.8
P10809_1012
82.8
P10809_1027
37.9
P10809_1046
58.2
P10809_1065
37.8
P10809_1111
51.0
Naive CD4 T-cell nTPM: 24.2
Samples: 6
Max nTPM: 41.8
Min nTPM: 4.5
P10809_1015
41.8
P10809_1030
4.5
P10809_1049
17.2
P10809_1068
34.7
P10809_1085
17.1
P10809_1112
29.8
Naive CD8 T-cell nTPM: 21.1
Samples: 6
Max nTPM: 34.1
Min nTPM: 4.6
P10809_1016
22.1
P10809_1031
4.6
P10809_1050
20.5
P10809_1069
34.1
P10809_1087
26.4
P10809_1110
19.1
T-reg nTPM: 21.5
Samples: 6
Max nTPM: 27.0
Min nTPM: 13.2
P10809_1018
26.8
P10809_1037
25.9
P10809_1056
27.0
P10809_1075
13.2
P10809_1094
18.3
P10809_1106
17.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
529.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 241.7
Samples: 4
Max nTPM: 317.2
Min nTPM: 146.3
RHH5202_R3573
208.8
RHH5230_R3602
294.3
RHH5259_R3631
146.3
RHH5288_R3660
317.2
Effector memory CD8 T-cell nTPM: 212.3
Samples: 4
Max nTPM: 292.2
Min nTPM: 153.0
RHH5203_R3574
153.0
RHH5231_R3603
292.2
RHH5260_R3632
203.1
RHH5289_R3661
200.7
MAIT T-cell nTPM: 529.5
Samples: 4
Max nTPM: 777.9
Min nTPM: 270.9
RHH5233_R3605
777.9
RHH5205_R3576
270.9
RHH5262_R3634
562.2
RHH5297_R3663
506.8
Memory CD4 T-cell TFH nTPM: 114.3
Samples: 4
Max nTPM: 128.3
Min nTPM: 103.0
RHH5300_R3666
106.2
RHH5236_R3608
103.0
RHH5265_R3637
119.5
RHH5208_R3579
128.3
Memory CD4 T-cell Th1 nTPM: 180.2
Samples: 4
Max nTPM: 247.4
Min nTPM: 134.4
RHH5210_R3581
134.4
RHH5302_R3668
247.4
RHH5238_R3610
175.9
RHH5267_R3639
163.2
Memory CD4 T-cell Th1/Th17 nTPM: 205.4
Samples: 4
Max nTPM: 305.2
Min nTPM: 161.5
RHH5303_R3669
305.2
RHH5211_R3582
168.5
RHH5239_R3611
186.4
RHH5268_R3640
161.5
Memory CD4 T-cell Th17 nTPM: 156.5
Samples: 4
Max nTPM: 216.2
Min nTPM: 94.4
RHH5304_R3670
216.2
RHH5212_R3583
152.8
RHH5240_R3612
162.7
RHH5269_R3641
94.4
Memory CD4 T-cell Th2 nTPM: 215.8
Samples: 4
Max nTPM: 347.1
Min nTPM: 167.5
RHH5305_R3671
167.5
RHH5213_R3584
170.5
RHH5241_R3613
347.1
RHH5270_R3642
177.9
Naive CD4 T-cell nTPM: 113.0
Samples: 4
Max nTPM: 177.2
Min nTPM: 57.8
RHH5306_R3672
177.2
RHH5214_R3585
57.8
RHH5242_R3614
120.5
RHH5271_R3643
96.3
Naive CD8 T-cell nTPM: 69.1
Samples: 4
Max nTPM: 85.3
Min nTPM: 48.1
RHH5201_R3572
48.1
RHH5229_R3601
76.4
RHH5258_R3630
85.3
RHH5287_R3659
66.5
Non-Vd2 gdTCR nTPM: 175.8
Samples: 4
Max nTPM: 279.6
Min nTPM: 117.3
RHH5235_R3607
144.3
RHH5264_R3636
279.6
RHH5207_R3578
117.3
RHH5299_R3665
161.8
T-reg nTPM: 93.8
Samples: 4
Max nTPM: 144.5
Min nTPM: 45.5
RHH5301_R3667
144.5
RHH5237_R3609
107.3
RHH5266_R3638
77.7
RHH5209_R3580
45.5
Terminal effector memory CD4 T-cell nTPM: 130.8
Samples: 2
Max nTPM: 173.8
Min nTPM: 87.7
RHH5243_R3615
87.7
RHH5272_R3644
173.8
Terminal effector memory CD8 T-cell nTPM: 155.9
Samples: 4
Max nTPM: 180.2
Min nTPM: 96.6
RHH5232_R3604
180.2
RHH5204_R3575
170.3
RHH5261_R3633
96.6
RHH5296_R3662
176.5
Vd2 gdTCR nTPM: 264.4
Samples: 4
Max nTPM: 412.5
Min nTPM: 124.6
RHH5234_R3606
412.5
RHH5206_R3577
124.6
RHH5263_R3635
278.1
RHH5298_R3664
242.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
